FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003744 through 18771 annotations produced 1 hits

tricorner (trc):

Annotation Number : CG8637
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003744
Gbrowse : chr3L:19824482-19827400 (-) // 100.0 //
Probeset : 1628306_at
Accessions : protein= NP_524170;, nucleotide= NM_079446;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from sequence or structural similari
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0003744.
BDGP gene expression has embryonic in situ data for trc: 4 pix of staining in 1 body parts.
Homophila reports that CG8637 is a close match (6e-11) to human gene CDS1;CHEK2;CHK2;LFS2;RAD53 (NP_665861), a gene associated with Li-Fraumeni syndrome, 609265 (3);Osteosarcoma, somatic, 259500 (3);Prostate cancer, familial, 176807 (3);{Breast and colorectal cancer, susceptibility to} (3);{Breast cancer, susceptibility to}, 114480 (3).
TRiP has 3 RNAi stocks for FBgn0003744 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003744 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	387 ± 9	4 of 4	1.40	Up
Head	265 ± 30	4 of 4	0.90	None
Eye	118 ± 7	4 of 4	0.42	Down
Thoracicoabdominal ganglion	348 ± 24	4 of 4	1.20	None
Salivary gland	197 ± 5	4 of 4	0.70	Down
Crop	275 ± 9	4 of 4	1.00	None
Midgut	183 ± 12	4 of 4	0.60	Down
Tubule	57 ± 3	4 of 4	0.20	Down
Hindgut	198 ± 9	4 of 4	0.70	Down
Heart	111 ± 6	4 of 4	0.39	Down
Fat body	169 ± 7	4 of 4	0.60	Down
Ovary	551 ± 12	4 of 4	1.90	Up
Testis	83 ± 3	4 of 4	0.30	Down
Male accessory glands	117 ± 13	4 of 4	0.40	Down
Virgin spermatheca	72 ± 6	4 of 4	0.26	Down
Mated spermatheca	72 ± 3	4 of 4	0.26	Down
Adult carcass	233 ± 18	4 of 4	0.80	None
Larval CNS	225 ± 20	4 of 4	0.79	Down
Larval Salivary gland	149 ± 10	4 of 4	0.53	Down
Larval midgut	365 ± 43	4 of 4	1.29	None
Larval tubule	82 ± 4	4 of 4	0.30	Down
Larval hindgut	246 ± 10	4 of 4	0.87	None
Larval fat body	155 ± 5	4 of 4	0.50	Down
Larval trachea	109 ± 10	4 of 4	0.39	Down
Larval carcass	338 ± 33	4 of 4	1.19	None
S2 cells (growing)	323 ± 12	4 of 4	1.14	None
Whole fly	283 ± 15	4 of 4

Looking for FBgn0003744. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720