FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003866 through 18771 annotations produced 1 hits

March 2006 (FlyBase/BDGP 5.3) (chr2L:21828594-21837013 (+) // 100.0 //):

Annotation Number : CG1374
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : chr2-55.8
Gbrowse :
Probeset : 1626150_at
Accessions : protein= , nucleotide=
Interpro : "0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from mutant phenotype /// 0
FlyMine data for chr2-55.8.
BioGrid reports that CG1374 interacts with CG5258 CG14110 CG18067 CG9277 CG7977 CG11579 CG11579 CG11579 CG17117 CG17117 CG11579 CG9653 CG2125 CG2125 CG18497 CG18497 CG4889 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	35 ± 1	4 of 4	1.40	Up
Head	25 ± 2	3 of 4	1.00	None
Eye	30 ± 1	4 of 4	1.21	None
Thoracicoabdominal ganglion	493 ± 13	4 of 4	19.80	Up
Salivary gland	12 ± 3	0 of 4	0.48	Down
Crop	79 ± 4	4 of 4	3.20	Up
Midgut	30 ± 1	3 of 4	1.20	Up
Tubule	239 ± 18	4 of 4	9.60	Up
Hindgut	13 ± 2	1 of 4	0.50	Down
Heart	45 ± 2	4 of 4	1.83	Up
Fat body	25 ± 4	3 of 4	1.02	None
Ovary	9 ± 1	3 of 4	0.40	Down
Testis	23 ± 1	4 of 4	0.90	None
Male accessory glands	12 ± 3	0 of 4	0.50	Down
Virgin spermatheca	25 ± 4	0 of 4	1.03	None
Mated spermatheca	28 ± 1	2 of 4	1.14	None
Adult carcass	65 ± 3	4 of 4	2.60	Up
Larval CNS	224 ± 22	4 of 4	9.03	Up
Larval Salivary gland	9 ± 1	0 of 4	0.37	Down
Larval midgut	71 ± 7	4 of 4	2.85	Up
Larval tubule	120 ± 3	4 of 4	4.80	Up
Larval hindgut	14 ± 1	2 of 4	0.59	Down
Larval fat body	36 ± 0	4 of 4	1.40	Up
Larval trachea	14 ± 3	2 of 4	0.59	Down
Larval carcass	189 ± 23	4 of 4	7.62	Up
S2 cells (growing)	86 ± 3	4 of 4	3.47	Up
Whole fly	24 ± 1	4 of 4

Looking for FBgn0003866. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720