FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003896 through 18771 annotations produced 1 hits

islet (tup):

Annotation Number : CG10619
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003896
Gbrowse : chr2L:18859514-18881256 (-) // 100.0 //
Probeset : 1625279_a_at
Accessions : protein= NP_476774; /// NP_476775;, nucleotide= NM_057426; /// NM_057427;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement /// 0
FlyMine data for FBgn0003896.
BDGP gene expression has embryonic in situ data for tup: 43 pix of staining in 27 body parts.
Homophila reports that CG10619 is a close match (1e-22) to human gene LHX3 (NP_835258), a gene associated with Pituitary hormone deficiency, combined, with rigid cervical spine, 262600 (3).
BioGrid reports that CG10619 interacts with CG10699 CG11883 CG14816 CG3924 CG6203 CG32369 CG4303 CG5009 CG5333 CG7787 CG8376 CG1389 CG2762 .
VDRC has 2 RNAi stocks for FBgn0003896 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	87 ± 7	4 of 4	18.80	Up
Head	15 ± 0	4 of 4	3.30	Up
Eye	0 ± 0	0 of 4	0.21	Down
Thoracicoabdominal ganglion	20 ± 1	4 of 4	4.30	Up
Salivary gland	6 ± 1	0 of 4	1.31	None
Crop	63 ± 7	4 of 4	13.60	Up
Midgut	8 ± 1	2 of 4	1.70	None
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	6 ± 0	4 of 4	1.50	None
Heart	57 ± 4	4 of 4	12.38	Up
Fat body	5 ± 2	1 of 4	1.13	None
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	2 ± 0	0 of 4	0.60	None
Male accessory glands	1 ± 0	0 of 4	0.30	Down
Virgin spermatheca	0 ± 0	0 of 4	0.19	Down
Mated spermatheca	0 ± 0	0 of 4	0.06	Down
Adult carcass	7 ± 3	0 of 4	1.50	None
Larval CNS	86 ± 25	4 of 4	18.40	Up
Larval Salivary gland	2 ± 0	0 of 4	0.43	Down
Larval midgut	9 ± 1	2 of 4	1.98	Up
Larval tubule	1 ± 0	0 of 4	0.30	Down
Larval hindgut	75 ± 5	4 of 4	16.18	Up
Larval fat body	1 ± 0	0 of 4	0.30	Down
Larval trachea	5 ± 1	3 of 4	1.16	None
Larval carcass	12 ± 1	4 of 4	2.71	Up
S2 cells (growing)	0 ± 0	0 of 4	0.05	Down
Whole fly	4 ± 0	2 of 4

Looking for FBgn0003896. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720