FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0003977 through 18771 annotations produced 1 hits

chr2R:19247785-19253777 (-) // 100.0 // (virilizer):

Annotation Number : CG3496
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1630976_at
Accessions : protein= , nucleotide= NP_524900;
Pathway : "0000375 // RNA splicing
Interpro : via transesterification reactions // inferred from mutant phenotype /// 0000381 // regulation of alternative nuclear mR
FlyMine data for full length.
BioGrid reports that CG3496 interacts with CG4911 CG7224 CG4502 CG4824 CG5466 CG7622 CG9793 CG11680 CG10388 CG10385 CG3241 CG4528 CG4528 Dmel CG18350 Dmel CG18350 Dmel CG18350 Dmel CG18350 Dmel CG18350 Dmel CG18350 Dmel CG18350 Dmel CG18350 Dmel CG18350 Dmel CG18350 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 2	2 of 4	1.50	Up
Head	28 ± 0	0 of 4	0.80	Down
Eye	28 ± 2	3 of 4	0.76	Down
Thoracicoabdominal ganglion	49 ± 4	0 of 4	1.30	None
Salivary gland	44 ± 4	0 of 4	1.18	None
Crop	41 ± 3	0 of 4	1.10	None
Midgut	37 ± 3	0 of 4	1.00	None
Tubule	35 ± 0	1 of 4	0.90	Down
Hindgut	37 ± 1	1 of 4	1.00	None
Heart	22 ± 2	1 of 4	0.60	Down
Fat body	14 ± 9	0 of 4	0.39	Down
Ovary	61 ± 4	4 of 4	1.60	Up
Testis	19 ± 1	0 of 4	0.50	Down
Male accessory glands	50 ± 1	0 of 4	1.30	Up
Virgin spermatheca	36 ± 4	1 of 4	0.97	None
Mated spermatheca	33 ± 2	1 of 4	0.90	None
Adult carcass	33 ± 0	0 of 4	0.90	Down
Larval CNS	84 ± 7	4 of 4	2.26	Up
Larval Salivary gland	76 ± 2	4 of 4	2.04	Up
Larval midgut	30 ± 3	0 of 4	0.80	None
Larval tubule	39 ± 4	2 of 4	1.10	None
Larval hindgut	48 ± 4	2 of 4	1.29	None
Larval fat body	39 ± 6	1 of 4	1.10	None
Larval trachea	58 ± 7	2 of 4	1.58	Up
Larval carcass	36 ± 3	1 of 4	0.97	None
S2 cells (growing)	63 ± 2	4 of 4	1.69	Up
Whole fly	37 ± 1	2 of 4

Looking for FBgn0003977. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720