FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004028 through 18771 annotations produced 1 hits

Troponin I (wupA):

Annotation Number : CG7178
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004028
Gbrowse : chrX:17999585-18010855 (-) // 100.0 //
Probeset : 1629235_s_at
Accessions : protein= NP_523398; /// NP_728137; /// NP_728138; /// NP_728139; /// NP_728140; /// NP_728141; /// NP_728142;, nucleotide= NM_078674; /// NM_167603; /// NM_167604; /// NM_167605; /// NM_167606; /// NM_167607; /// NM_167608;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005861 // troponin complex // non-traceable author statement
Interpro : 0003779 // actin binding // non-traceable author statement /// 0003779 // actin binding // inferred from electronic anno
FlyMine data for FBgn0004028.
BDGP gene expression has embryonic in situ data for wupA: 17 pix of staining in 3 body parts.
BioGrid reports that CG7178 interacts with CG8770 CG9073 CG7434 CG17927 CG17927 CG17927 CG4843 .
TRiP has 1 RNAi stocks for FBgn0004028 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	73 ± 9	4 of 4	0.00	Down
Head	1713 ± 111	4 of 4	0.90	None
Eye	303 ± 53	4 of 4	0.17	Down
Thoracicoabdominal ganglion	108 ± 14	4 of 4	0.10	Down
Salivary gland	40 ± 11	1 of 4	0.02	Down
Crop	5799 ± 345	4 of 4	3.20	Up
Midgut	1410 ± 26	4 of 4	0.80	Down
Tubule	213 ± 22	4 of 4	0.10	Down
Hindgut	4118 ± 78	4 of 4	2.30	Up
Heart	4553 ± 258	4 of 4	2.50	Up
Fat body	324 ± 110	4 of 4	0.18	Down
Ovary	148 ± 12	4 of 4	0.10	Down
Testis	270 ± 1	4 of 4	0.10	Down
Male accessory glands	2660 ± 59	4 of 4	1.50	Up
Virgin spermatheca	653 ± 65	4 of 4	0.36	Down
Mated spermatheca	1068 ± 81	4 of 4	0.59	Down
Adult carcass	3602 ± 240	4 of 4	2.00	Up
Larval CNS	36 ± 3	4 of 4	0.02	Down
Larval Salivary gland	54 ± 4	4 of 4	0.03	Down
Larval midgut	1302 ± 38	4 of 4	0.71	Down
Larval tubule	120 ± 12	4 of 4	0.10	Down
Larval hindgut	3910 ± 58	4 of 4	2.14	Up
Larval fat body	18 ± 5	1 of 4	0.00	Down
Larval trachea	1541 ± 836	4 of 4	0.84	None
Larval carcass	4579 ± 462	4 of 4	2.51	Up
S2 cells (growing)	7 ± 1	1 of 4	0.00	Down
Whole fly	1824 ± 94	4 of 4

Looking for FBgn0004028. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720