FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004170 through 18771 annotations produced 1 hits

March 2006 (FlyBase/BDGP 5.3) (chrX:290092-291514 (+) // 100.0 //):

Annotation Number : CG3827
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : chr1-0.0
Gbrowse :
Probeset : 1625273_at
Accessions : protein= , nucleotide=
Interpro : "0006355 // regulation of transcription
FlyMine data for chr1-0.0.
BioGrid reports that CG3827 interacts with CG6474 CG6494 CG6494 CG32120 CG8361 CG8328 CG8333 CG32491 CG32491 CG32491 CG32491 CG32491 CG32491 CG1641 CG8573 CG8573 CG8573 CG8573 CG8573 CG8573 CG4889 CG7803 CG7508 CG8704 CG6494 CG1856 Dmel CG18350 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.60	None
Head	2 ± 1	0 of 4	0.40	None
Eye	4 ± 1	1 of 4	0.71	None
Thoracicoabdominal ganglion	4 ± 0	0 of 4	0.80	None
Salivary gland	5 ± 1	0 of 4	0.84	None
Crop	6 ± 0	0 of 4	1.00	None
Midgut	12 ± 1	1 of 4	2.00	Up
Tubule	3 ± 0	0 of 4	0.60	Down
Hindgut	6 ± 1	0 of 4	1.00	None
Heart	4 ± 1	0 of 4	0.74	None
Fat body	8 ± 2	0 of 4	1.34	None
Ovary	3 ± 1	0 of 4	0.60	None
Testis	1 ± 0	0 of 4	0.30	Down
Male accessory glands	6 ± 3	0 of 4	1.00	None
Virgin spermatheca	5 ± 2	0 of 4	0.84	None
Mated spermatheca	3 ± 2	0 of 4	0.61	None
Adult carcass	3 ± 1	0 of 4	0.60	None
Larval CNS	30 ± 2	4 of 4	4.95	Up
Larval Salivary gland	8 ± 1	0 of 4	1.30	None
Larval midgut	4 ± 2	0 of 4	0.76	None
Larval tubule	4 ± 1	0 of 4	0.70	None
Larval hindgut	8 ± 2	3 of 4	1.41	None
Larval fat body	4 ± 2	0 of 4	0.70	None
Larval trachea	15 ± 1	4 of 4	2.54	Up
Larval carcass	12 ± 2	2 of 4	2.03	None
S2 cells (growing)	1 ± 0	0 of 4	0.16	Down
Whole fly	6 ± 0	0 of 4

Looking for FBgn0004170. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720