Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0004177 through 18771 annotations produced 1 hits



chr2L:7827742-7832745 (+) // 100.0 // (microtubule star):

Annotation Number : CG7109
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1640841_at
Accessions : protein= , nucleotide= NP_476805;
Pathway : "0000226 // microtubule cytoskeleton organization // inferred from mutant phenotype /// 0000278 // mitotic cell cycle //
Interpro : engulfment // inferred from mutant phenotype /// 0007015 // actin filament organization // inferred from mutant phenoty
FlyMine data for full length.
BioGrid reports that CG7109 interacts with CG7285 CG7937 CG8349 CG8882 CG9526 CG9578 CG9876 CG9977 CG11420 CG2845 CG2845 CG2845 CG2845 CG9375 CG9375 CG15793 CG5643 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain921 154 of 4 1.90Up
Head488 344 of 4 1.00None
Eye846 264 of 4 1.73Up
Thoracicoabdominal ganglion809 314 of 4 1.70Up
Salivary gland406 234 of 4 0.83None
Crop672 234 of 4 1.40Up
Midgut342 164 of 4 0.70Down
Tubule749 214 of 4 1.50Up
Hindgut570 264 of 4 1.20None
Heart753 544 of 4 1.55Up
Fat body528 784 of 4 1.08None
Ovary664 124 of 4 1.40Up
Testis170 94 of 4 0.40Down
Male accessory glands407 204 of 4 0.80None
Virgin spermatheca815 124 of 4 1.67Up
Mated spermatheca701 304 of 4 1.44Up
Adult carcass443 394 of 4 0.90None
Larval CNS943 914 of 4 1.93Up
Larval Salivary gland436 174 of 4 0.90None
Larval midgut430 94 of 4 0.88None
Larval tubule842 244 of 4 1.70Up
Larval hindgut677 384 of 4 1.39Up
Larval fat body795 704 of 4 1.60Up
Larval trachea700 464 of 4 1.44Up
Larval carcass326 144 of 4 0.67Down
S2 cells (growing)510 114 of 4 1.05None
Whole fly487 274 of 4

Looking for FBgn0004177. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime