Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0004380 through 18771 annotations produced 1 hits



Kinesin-like protein at 64D (Klp64D):

Annotation Number : CG10642
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004380
Gbrowse : chr3L:5350320-5352354 (-) // 100.0 //
Probeset : 1628601_at
Accessions : protein= NP_523934;, nucleotide= NM_079210;
Pathway : 0005871 // kinesin complex // inferred from sequence or structural similarity /// 0005874 // microtubule // inferred fro
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from elec
FlyMine data for FBgn0004380.
Homophila reports that CG10642 is a close match (6e-59) to human gene CFEOM1;FEOM1;KIAA1708;KIF21A (NP_060111), a gene associated with Fibrosis of extraocular muscles, congenital, 1, 135700 (3).
BioGrid reports that CG10642 interacts with CG5717 .
TRiP has 1 RNAi stocks for FBgn0004380 available for purchase.
VDRC has 4 RNAi stocks for FBgn0004380 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain371 ± 134 of 4 5.20Up
Head139 ± 54 of 4 1.90Up
Eye129 ± 34 of 4 1.80Up
Thoracicoabdominal ganglion393 ± 64 of 4 5.50Up
Salivary gland87 ± 84 of 4 1.22None
Crop134 ± 54 of 4 1.90Up
Midgut79 ± 04 of 4 1.10None
Tubule89 ± 34 of 4 1.20Up
Hindgut92 ± 34 of 4 1.30Up
Heart54 ± 24 of 4 0.76Down
Fat body46 ± 54 of 4 0.64Down
Ovary160 ± 54 of 4 2.20Up
Testis33 ± 04 of 4 0.50Down
Male accessory glands45 ± 34 of 4 0.60Down
Virgin spermatheca47 ± 24 of 4 0.65Down
Mated spermatheca47 ± 44 of 4 0.65Down
Adult carcass69 ± 54 of 4 1.00None
Larval CNS203 ± 204 of 4 2.83Up
Larval Salivary gland84 ± 54 of 4 1.17None
Larval midgut52 ± 44 of 4 0.73Down
Larval tubule116 ± 24 of 4 1.60Up
Larval hindgut82 ± 34 of 4 1.14None
Larval fat body50 ± 24 of 4 0.70Down
Larval trachea77 ± 74 of 4 1.08None
Larval carcass181 ± 44 of 4 2.53Up
S2 cells (growing)94 ± 14 of 4 1.32Up
Whole fly71 ± 54 of 4

Looking for FBgn0004380. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime