FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004456 through 18771 annotations produced 2 hits

PS1 integrin (mew):

Annotation Number : CG1771
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004456
Gbrowse : chrX:13108441-13151204 (-) // 100.0 //
Probeset : 1640547_at
Accessions : protein= NP_511145; /// NP_727679;, nucleotide= NM_078590; /// NM_167354;
Pathway : open tracheal system // traceable author statement /// 0007427 // epithelial cell migration
Interpro : open tracheal system // traceable author statement /// 0007431 // salivary gland development // traceable author statem
FlyMine data for FBgn0004456.
BDGP gene expression has embryonic in situ data for mew: 53 pix of staining in 26 body parts.
Homophila reports that CG1771 is a close match (1e-28) to human gene CD11B;CR3A;ITGAM;MAC1A;SLEB6 (NP_000623), a gene associated with {Systemic lupus erythematous, association with susceptibility to, 6}, 609939 (3).
BioGrid reports that CG1771 interacts with CG8376 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG3411 CG10580 .
TRiP has 1 RNAi stocks for FBgn0004456 available for purchase.
VDRC has 2 RNAi stocks for FBgn0004456 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	66 ± 4	4 of 4	0.70	Down
Head	73 ± 5	4 of 4	0.80	Down
Eye	34 ± 2	4 of 4	0.35	Down
Thoracicoabdominal ganglion	92 ± 3	4 of 4	1.00	None
Salivary gland	306 ± 10	4 of 4	3.17	Up
Crop	248 ± 4	4 of 4	2.60	Up
Midgut	217 ± 10	4 of 4	2.20	Up
Tubule	226 ± 15	4 of 4	2.30	Up
Hindgut	225 ± 6	4 of 4	2.30	Up
Heart	703 ± 63	4 of 4	7.26	Up
Fat body	318 ± 41	4 of 4	3.29	Up
Ovary	58 ± 3	4 of 4	0.60	Down
Testis	18 ± 1	4 of 4	0.20	Down
Male accessory glands	114 ± 3	4 of 4	1.20	Up
Virgin spermatheca	216 ± 11	4 of 4	2.24	Up
Mated spermatheca	254 ± 14	4 of 4	2.62	Up
Adult carcass	163 ± 21	4 of 4	1.70	None
Larval CNS	126 ± 19	4 of 4	1.31	Up
Larval Salivary gland	449 ± 56	4 of 4	4.64	Up
Larval midgut	166 ± 5	4 of 4	1.72	Up
Larval tubule	112 ± 6	4 of 4	1.20	None
Larval hindgut	207 ± 10	4 of 4	2.14	Up
Larval fat body	42 ± 4	4 of 4	0.40	Down
Larval trachea	225 ± 34	4 of 4	2.33	Up
Larval carcass	212 ± 15	4 of 4	2.20	Up
S2 cells (growing)	41 ± 1	4 of 4	0.43	Down
Whole fly	96 ± 4	4 of 4

PS1 integrin (mew):

Annotation Number : CG1771
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004456
Gbrowse : chrX:13109190-13152523 (-) // 100.0 //
Probeset : 1634290_a_at
Accessions : protein= NP_511145; /// NP_727679;, nucleotide= NM_078590; /// NM_167354;
Pathway : open tracheal system // traceable author statement /// 0007427 // epithelial cell migration
Interpro : open tracheal system // traceable author statement /// 0007431 // salivary gland development // traceable author statem
FlyMine data for FBgn0004456.
BDGP gene expression has embryonic in situ data for mew: 53 pix of staining in 26 body parts.
Homophila reports that CG1771 is a close match (1e-28) to human gene CD11B;CR3A;ITGAM;MAC1A;SLEB6 (NP_000623), a gene associated with {Systemic lupus erythematous, association with susceptibility to, 6}, 609939 (3).
BioGrid reports that CG1771 interacts with CG8376 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG9623 CG3411 CG10580 .
TRiP has 1 RNAi stocks for FBgn0004456 available for purchase.
VDRC has 2 RNAi stocks for FBgn0004456 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	19 ± 2	4 of 4	0.80	None
Head	19 ± 1	1 of 4	0.80	Down
Eye	14 ± 2	2 of 4	0.57	Down
Thoracicoabdominal ganglion	27 ± 1	4 of 4	1.10	None
Salivary gland	64 ± 10	4 of 4	2.64	Up
Crop	69 ± 2	4 of 4	2.80	Up
Midgut	44 ± 3	4 of 4	1.80	Up
Tubule	36 ± 1	3 of 4	1.50	Up
Hindgut	62 ± 5	4 of 4	2.50	Up
Heart	177 ± 9	4 of 4	7.23	Up
Fat body	50 ± 10	4 of 4	2.05	Up
Ovary	12 ± 1	2 of 4	0.50	Down
Testis	6 ± 0	0 of 4	0.30	Down
Male accessory glands	35 ± 3	4 of 4	1.50	Up
Virgin spermatheca	16 ± 2	3 of 4	0.66	Down
Mated spermatheca	18 ± 3	3 of 4	0.75	None
Adult carcass	47 ± 8	4 of 4	1.90	None
Larval CNS	20 ± 4	4 of 4	0.82	None
Larval Salivary gland	77 ± 5	4 of 4	3.17	Up
Larval midgut	27 ± 2	2 of 4	1.13	None
Larval tubule	25 ± 1	4 of 4	1.10	None
Larval hindgut	38 ± 3	4 of 4	1.57	Up
Larval fat body	10 ± 3	0 of 4	0.40	Down
Larval trachea	93 ± 9	4 of 4	3.81	Up
Larval carcass	33 ± 3	4 of 4	1.38	None
S2 cells (growing)	16 ± 1	3 of 4	0.68	Down
Whole fly	24 ± 0	4 of 4

Looking for FBgn0004456. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720