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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0004552 through 18771 annotations produced 1 hits



adipokinetic hormone (Akh):

Annotation Number : CG1171
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004552
Gbrowse : chr3L:4141585-4141893 (+) // 100.0 //
Probeset : 1631816_at
Accessions : protein= NP_523918;, nucleotide= NM_079194;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005179 // hormone activity // inferred from electronic annotation /// 0005184 // neuropeptide hormone activity // infer
FlyMine data for FBgn0004552.
TRiP has 2 RNAi stocks for FBgn0004552 available for purchase.
VDRC has 2 RNAi stocks for FBgn0004552 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain913 524 of 423.80Up
Head528 464 of 413.80Up
Eye1 00 of 4 0.03Down
Thoracicoabdominal ganglion163 564 of 4 4.30None
Salivary gland2 00 of 4 0.06Down
Crop18 50 of 4 0.50Down
Midgut71 60 of 4 1.90Up
Tubule2 00 of 4 0.10Down
Hindgut2 00 of 4 0.10Down
Heart5 20 of 4 0.13Down
Fat body1 00 of 4 0.04Down
Ovary0 00 of 4 0.00Down
Testis3 10 of 4 0.10Down
Male accessory glands1 00 of 4 0.00Down
Virgin spermatheca1 00 of 4 0.04Down
Mated spermatheca1 00 of 4 0.04Down
Adult carcass3 10 of 4 0.10Down
Larval CNS93 394 of 4 2.43None
Larval Salivary gland2 00 of 4 0.05Down
Larval midgut17 20 of 4 0.44Down
Larval tubule3 10 of 4 0.10Down
Larval hindgut9 20 of 4 0.25Down
Larval fat body2 10 of 4 0.10Down
Larval trachea3 20 of 4 0.10Down
Larval carcass19 20 of 4 0.51Down
S2 cells (growing)1 00 of 4 0.03Down
Whole fly38 52 of 4

Looking for FBgn0004552. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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