Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0004569 through 18771 annotations produced 1 hits



argos (argos):

Annotation Number : CG4531
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004569
Gbrowse : chr3L:16463478-16476801 (-) // 100.0 //
Probeset : 1641578_at
Accessions : protein= NP_524107;, nucleotide= NM_079383;
Pathway : 0005576 // extracellular region // inferred from sequence or structural similarity /// 0005576 // extracellular region /
Interpro : 0005154 // epidermal growth factor receptor binding // non-traceable author statement /// 0005154 // epidermal growth fa
FlyMine data for FBgn0004569.
BDGP gene expression has embryonic in situ data for argos: 42 pix of staining in 29 body parts.
BioGrid reports that CG4531 interacts with CG11579 CG11579 CG11579 CG11579 CG11579 CG11579 CG3619 CG3619 CG12676 CG2845 CG9375 CG9375 CG6775 CG6775 CG12559 CG4385 CG4385 CG4385 CG4385 CG4385 CG4385 CG12284 CG10079 CG10079 CG10079 CG10079 CG10491 CG5123 CG15793 CG8293 CG2248 CG1004 CG6464 CG1921 CG1921 CG1921 .
TRiP has 1 RNAi stocks for FBgn0004569 available for purchase.
VDRC has 4 RNAi stocks for FBgn0004569 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain19 ± 14 of 4 0.70Down
Head84 ± 44 of 4 2.80Up
Eye198 ± 114 of 4 6.51Up
Thoracicoabdominal ganglion27 ± 34 of 4 0.90None
Salivary gland28 ± 43 of 4 0.94None
Crop63 ± 54 of 4 2.10Up
Midgut11 ± 12 of 4 0.40Down
Tubule15 ± 23 of 4 0.50Down
Hindgut48 ± 44 of 4 1.60Up
Heart19 ± 14 of 4 0.65Down
Fat body7 ± 11 of 4 0.25Down
Ovary18 ± 24 of 4 0.60Down
Testis5 ± 04 of 4 0.20Down
Male accessory glands6 ± 21 of 4 0.20Down
Virgin spermatheca8 ± 11 of 4 0.28Down
Mated spermatheca13 ± 14 of 4 0.45Down
Adult carcass63 ± 44 of 4 2.10Up
Larval CNS89 ± 54 of 4 2.93Up
Larval Salivary gland3 ± 10 of 4 0.13Down
Larval midgut7 ± 21 of 4 0.25Down
Larval tubule9 ± 22 of 4 0.30Down
Larval hindgut19 ± 14 of 4 0.62Down
Larval fat body4 ± 00 of 4 0.10Down
Larval trachea48 ± 74 of 4 1.58Up
Larval carcass13 ± 14 of 4 0.45Down
S2 cells (growing)797 ± 124 of 426.10Up
Whole fly30 ± 24 of 4

Looking for FBgn0004569. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime