FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004618 through 18771 annotations produced 1 hits

glass (gl):

Annotation Number : CG7672
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004618
Gbrowse : chr3R:14193650-14198460 (-) // 100.0 //
Probeset : 1623923_a_at
Accessions : protein= NP_476854; /// NP_732330;, nucleotide= NM_057506; /// NM_169807;
Pathway : DNA-dependent // inferred from mutant phenotype /// 0007601 // visual perception // inferred from electronic annotation
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from direct assay ///
FlyMine data for FBgn0004618.
BDGP gene expression has embryonic in situ data for gl: 26 pix of staining in 6 body parts.
Homophila reports that CG7672 is a close match (9e-12) to human gene HSAL4;SALL4 (NP_065169), a gene associated with Duane-radial ray syndrome, 607323 (3);IVIC syndrome, 147750 (3).
BioGrid reports that CG7672 interacts with CG3166 CG6494 CG9375 CG9375 CG32466 CG6348 CG9949 CG9949 CG9949 CG9949 CG3936 CG3936 CG9842 CG4637 .
TRiP has 1 RNAi stocks for FBgn0004618 available for purchase.
VDRC has 1 RNAi stocks for FBgn0004618 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	17 ± 1	4 of 4	1.40	None
Head	156 ± 4	4 of 4	12.30	Up
Eye	341 ± 17	4 of 4	26.83	Up
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.20	Down
Salivary gland	9 ± 3	1 of 4	0.71	None
Crop	2 ± 1	0 of 4	0.20	Down
Midgut	1 ± 0	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.30	Down
Hindgut	2 ± 1	1 of 4	0.20	Down
Heart	3 ± 1	0 of 4	0.28	Down
Fat body	5 ± 3	2 of 4	0.45	Down
Ovary	4 ± 0	2 of 4	0.30	Down
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	5 ± 1	1 of 4	0.40	Down
Virgin spermatheca	1 ± 0	0 of 4	0.15	Down
Mated spermatheca	2 ± 1	0 of 4	0.20	Down
Adult carcass	5 ± 2	0 of 4	0.40	Down
Larval CNS	13 ± 3	4 of 4	1.08	None
Larval Salivary gland	2 ± 0	1 of 4	0.21	Down
Larval midgut	3 ± 1	0 of 4	0.26	Down
Larval tubule	2 ± 0	0 of 4	0.20	Down
Larval hindgut	1 ± 1	1 of 4	0.15	Down
Larval fat body	2 ± 0	0 of 4	0.20	Down
Larval trachea	6 ± 7	1 of 4	0.52	None
Larval carcass	1 ± 0	0 of 4	0.13	Down
S2 cells (growing)	2 ± 0	1 of 4	0.21	Down
Whole fly	12 ± 1	4 of 4

Looking for FBgn0004618. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720