FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004859 through 18771 annotations produced 1 hits

Cubitus interruptus (ci):

Annotation Number : CG2125
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004859
Gbrowse : chr4:68333-77667 (-) // 100.0 //
Probeset : 1623144_at
Accessions : protein= NP_524617;, nucleotide= NM_079878;
Pathway : DNA-dependent // non-traceable author statement /// 0007224 // smoothened signaling pathway // inferred from expression
Interpro : open tracheal system // inferred from mutant phenotype /// 0045449 // regulation of transcription // traceable author s
FlyMine data for FBgn0004859.
BDGP gene expression has embryonic in situ data for ci: 20 pix of staining in 15 body parts.
Homophila reports that CG2125 is a close match (9e-11) to human gene AITD3;ZFAT1;ZNF406 (NP_065914), a gene associated with {Autoimmune thyroid disease, susceptibility to, 3}, 608175 (3).
BioGrid reports that CG2125 interacts with CG6054 CG11579 CG11579 CG4379 CG8367 CG8367 CG8367 CG8367 CG9015 CG6551 CG6551 CG6551 CG10197 CG10079 CG1374 CG1374 CG2411 CG2411 CG2411 CG2411 CG2411 CG2411 CG2411 CG2411 CG4889 CG4889 CG4637 CG4637 CG4637 CG4637 CG4637 CG3886 CG7508 CG1772 CG1464 CG15319 CG15319 CG15319 CG15319 CG18412 CG1708 CG1708 CG6551 CG6054 .
TRiP has 4 RNAi stocks for FBgn0004859 available for purchase.
VDRC has 2 RNAi stocks for FBgn0004859 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	82 ± 3	4 of 4	1.00	None
Head	147 ± 7	4 of 4	1.70	Up
Eye	83 ± 1	4 of 4	0.98	None
Thoracicoabdominal ganglion	80 ± 4	4 of 4	1.00	None
Salivary gland	96 ± 6	4 of 4	1.13	None
Crop	137 ± 8	4 of 4	1.60	Up
Midgut	11 ± 1	4 of 4	0.10	Down
Tubule	329 ± 46	4 of 4	3.90	Up
Hindgut	168 ± 2	4 of 4	2.00	Up
Heart	107 ± 14	4 of 4	1.27	None
Fat body	191 ± 10	4 of 4	2.26	Up
Ovary	46 ± 1	4 of 4	0.50	Down
Testis	23 ± 0	4 of 4	0.30	Down
Male accessory glands	29 ± 2	4 of 4	0.30	Down
Virgin spermatheca	264 ± 14	4 of 4	3.12	Up
Mated spermatheca	251 ± 17	4 of 4	2.96	Up
Adult carcass	132 ± 8	4 of 4	1.60	Up
Larval CNS	455 ± 13	4 of 4	5.36	Up
Larval Salivary gland	92 ± 8	4 of 4	1.09	None
Larval midgut	23 ± 4	4 of 4	0.27	Down
Larval tubule	241 ± 13	4 of 4	2.80	Up
Larval hindgut	150 ± 6	4 of 4	1.77	Up
Larval fat body	301 ± 15	4 of 4	3.50	Up
Larval trachea	685 ± 28	4 of 4	8.08	Up
Larval carcass	351 ± 11	4 of 4	4.14	Up
S2 cells (growing)	6 ± 0	3 of 4	0.08	Down
Whole fly	84 ± 6	4 of 4

Looking for FBgn0004859. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720