FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004860 through 18771 annotations produced 1 hits

Polyhomeotic (ph-d):

Annotation Number : CG3895
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004860
Gbrowse : chrX:2010898-2015757 (-) // 100.0 //
Probeset : 1626736_at
Accessions : protein= NP_001096865; /// NP_524794;, nucleotide= NM_001103395; /// NM_080055;
Pathway : 0000785 // chromatin // non-traceable author statement /// 0005634 // nucleus // inferred from direct assay /// 0005634
Interpro : 0003682 // chromatin binding // inferred from direct assay /// 0005515 // protein binding // inferred from physical inte
FlyMine data for FBgn0004860.
BioGrid reports that CG3895 interacts with CG4195 CG17835 CG32443 CG32443 CG2759 CG6464 CG4637 CG2530 .
TRiP has 2 RNAi stocks for FBgn0004860 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	36 ± 2	4 of 4	1.50	Up
Head	23 ± 1	2 of 4	1.00	None
Eye	10 ± 2	1 of 4	0.42	Down
Thoracicoabdominal ganglion	29 ± 0	1 of 4	1.20	None
Salivary gland	11 ± 3	0 of 4	0.44	Down
Crop	26 ± 2	0 of 4	1.10	None
Midgut	20 ± 1	1 of 4	0.80	None
Tubule	6 ± 1	0 of 4	0.30	Down
Hindgut	21 ± 3	0 of 4	0.90	None
Heart	7 ± 1	0 of 4	0.30	Down
Fat body	32 ± 5	0 of 4	1.32	None
Ovary	34 ± 0	4 of 4	1.40	Up
Testis	12 ± 0	0 of 4	0.50	Down
Male accessory glands	28 ± 3	0 of 4	1.10	None
Virgin spermatheca	24 ± 4	0 of 4	0.98	None
Mated spermatheca	16 ± 1	0 of 4	0.66	Down
Adult carcass	25 ± 4	0 of 4	1.00	None
Larval CNS	61 ± 4	4 of 4	2.49	Up
Larval Salivary gland	27 ± 2	1 of 4	1.12	None
Larval midgut	18 ± 6	0 of 4	0.74	None
Larval tubule	12 ± 3	0 of 4	0.50	Down
Larval hindgut	20 ± 2	0 of 4	0.82	None
Larval fat body	18 ± 2	0 of 4	0.70	None
Larval trachea	14 ± 1	0 of 4	0.60	Down
Larval carcass	17 ± 5	0 of 4	0.72	None
S2 cells (growing)	139 ± 4	4 of 4	5.66	Up
Whole fly	24 ± 1	1 of 4

Looking for FBgn0004860. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720