FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004875 through 18771 annotations produced 1 hits

encore (enc):

Annotation Number : CG10847
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004875
Gbrowse : chr3L:3818686-3841202 (+) // 99.92 //
Probeset : 1632178_at
Accessions : protein= NP_001097496; /// NP_001097497; /// NP_524765; /// NP_995992;, nucleotide= NM_001104026; /// NM_001104027; /// NM_080026; /// NM_206270;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // non-traceable author statement /// 000573
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation
FlyMine data for FBgn0004875.
BioGrid reports that CG10847 interacts with CG12743 .
TRiP has 1 RNAi stocks for FBgn0004875 available for purchase.
VDRC has 2 RNAi stocks for FBgn0004875 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	721 ± 30	4 of 4	5.70	Up
Head	205 ± 20	4 of 4	1.60	Up
Eye	138 ± 12	4 of 4	1.09	None
Thoracicoabdominal ganglion	601 ± 8	4 of 4	4.70	Up
Salivary gland	114 ± 12	4 of 4	0.90	None
Crop	119 ± 1	4 of 4	0.90	None
Midgut	75 ± 10	4 of 4	0.60	Down
Tubule	61 ± 4	4 of 4	0.50	Down
Hindgut	101 ± 8	4 of 4	0.80	None
Heart	95 ± 5	4 of 4	0.75	Down
Fat body	135 ± 31	4 of 4	1.06	None
Ovary	309 ± 3	4 of 4	2.40	Up
Testis	22 ± 3	4 of 4	0.20	Down
Male accessory glands	358 ± 6	4 of 4	2.80	Up
Virgin spermatheca	81 ± 8	4 of 4	0.64	Down
Mated spermatheca	86 ± 1	4 of 4	0.69	Down
Adult carcass	125 ± 9	4 of 4	1.00	None
Larval CNS	658 ± 36	4 of 4	5.20	Up
Larval Salivary gland	120 ± 8	4 of 4	0.95	None
Larval midgut	73 ± 7	4 of 4	0.58	Down
Larval tubule	86 ± 3	4 of 4	0.70	Down
Larval hindgut	133 ± 9	4 of 4	1.05	None
Larval fat body	92 ± 2	4 of 4	0.70	Down
Larval trachea	138 ± 20	4 of 4	1.09	None
Larval carcass	132 ± 6	4 of 4	1.04	None
S2 cells (growing)	303 ± 6	4 of 4	2.39	Up
Whole fly	126 ± 6	4 of 4

Looking for FBgn0004875. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720