Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0004911 through 18771 annotations produced 1 hits



():

Annotation Number : CG32265
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004911
Gbrowse : chr3L:3934717-3935992 (+) // 100.0 //
Probeset : 1639350_at
Accessions : protein= , nucleotide= NR_003122;
FlyMine data for FBgn0004911.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.30None
Head5 11 of 4 1.20None
Eye1 11 of 4 0.34None
Thoracicoabdominal ganglion2 10 of 4 0.50None
Salivary gland70 44 of 413.74Up
Crop56 14 of 411.00Up
Midgut9 22 of 4 1.90None
Tubule2 00 of 4 0.50Down
Hindgut272 84 of 453.50Up
Heart1 00 of 4 0.34None
Fat body3 20 of 4 0.71None
Ovary2 00 of 4 0.40None
Testis0 00 of 4 0.10None
Male accessory glands6 20 of 4 1.30None
Virgin spermatheca1 00 of 4 0.27None
Mated spermatheca1 00 of 4 0.37None
Adult carcass7 30 of 4 1.50None
Larval CNS0 00 of 4 0.16None
Larval Salivary gland2 00 of 4 0.51None
Larval midgut17 24 of 4 3.45Up
Larval tubule2 10 of 4 0.50None
Larval hindgut43 64 of 4 8.45Up
Larval fat body4 10 of 4 0.80None
Larval trachea4 41 of 4 0.91None
Larval carcass5 10 of 4 1.13None
S2 cells (growing)2 10 of 4 0.42None
Whole fly5 11 of 4

Looking for FBgn0004911. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime