FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0004919 through 18771 annotations produced 2 hits

chr2R:20960142-20971843 (-) // 100.0 // (goliath):

Annotation Number : CG2679
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1636407_at
Accessions : protein= , nucleotide= NP_001163300; /// NP_523864; /// NP_726508;
Pathway : "0001707 // mesoderm formation // inferred from expression pattern /// 0006350 // transcription // inferred from electro
Interpro : DNA-dependent // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from el
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	86 ± 5	4 of 4	2.80	Up
Head	596 ± 25	4 of 4	19.30	Up
Eye	1124 ± 321	4 of 4	36.41	Up
Thoracicoabdominal ganglion	72 ± 5	4 of 4	2.30	Up
Salivary gland	12 ± 2	0 of 4	0.40	None
Crop	1 ± 0	0 of 4	0.10	None
Midgut	1 ± 0	0 of 4	0.00	None
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	1 ± 0	0 of 4	0.10	None
Heart	0 ± 0	0 of 4	0.03	None
Fat body	2 ± 1	0 of 4	0.07	None
Ovary	2 ± 1	0 of 4	0.10	None
Testis	54 ± 3	4 of 4	1.80	None
Male accessory glands	1 ± 0	0 of 4	0.00	None
Virgin spermatheca	12 ± 1	1 of 4	0.41	None
Mated spermatheca	12 ± 6	0 of 4	0.40	None
Adult carcass	3 ± 0	0 of 4	0.10	None
Larval CNS	20 ± 4	1 of 4	0.67	None
Larval Salivary gland	3 ± 1	0 of 4	0.12	None
Larval midgut	1 ± 0	0 of 4	0.04	None
Larval tubule	1 ± 0	0 of 4	0.00	None
Larval hindgut	0 ± 0	0 of 4	0.03	None
Larval fat body	16 ± 2	0 of 4	0.50	None
Larval trachea	14 ± 25	1 of 4	0.47	None
Larval carcass	1 ± 0	0 of 4	0.04	None
S2 cells (growing)	20 ± 0	4 of 4	0.67	None
Whole fly	30 ± 11	2 of 4

chr2R:20961189-20965196 (-) // 100.0 // (goliath):

Annotation Number : CG2679
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1627719_at
Accessions : protein= , nucleotide= NP_001163300; /// NP_523864; /// NP_726508;
Pathway : "0001707 // mesoderm formation // inferred from expression pattern /// 0006350 // transcription // inferred from electro
Interpro : DNA-dependent // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from el
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	263 ± 4	4 of 4	9.20	Up
Head	72 ± 6	4 of 4	2.50	Up
Eye	48 ± 8	4 of 4	1.68	None
Thoracicoabdominal ganglion	184 ± 12	4 of 4	6.40	Up
Salivary gland	110 ± 5	4 of 4	3.88	Up
Crop	50 ± 4	4 of 4	1.80	Up
Midgut	70 ± 5	4 of 4	2.50	Up
Tubule	89 ± 10	4 of 4	3.10	Up
Hindgut	36 ± 2	4 of 4	1.30	None
Heart	25 ± 3	4 of 4	0.90	None
Fat body	14 ± 1	4 of 4	0.50	Down
Ovary	2 ± 0	1 of 4	0.10	Down
Testis	23 ± 1	4 of 4	0.80	None
Male accessory glands	11 ± 3	2 of 4	0.40	Down
Virgin spermatheca	65 ± 2	4 of 4	2.28	Up
Mated spermatheca	89 ± 13	4 of 4	3.14	Up
Adult carcass	40 ± 1	4 of 4	1.40	Up
Larval CNS	215 ± 32	4 of 4	7.54	Up
Larval Salivary gland	79 ± 9	4 of 4	2.76	Up
Larval midgut	127 ± 17	4 of 4	4.46	Up
Larval tubule	108 ± 4	4 of 4	3.80	Up
Larval hindgut	34 ± 1	4 of 4	1.22	None
Larval fat body	361 ± 23	4 of 4	12.60	Up
Larval trachea	76 ± 19	4 of 4	2.67	Up
Larval carcass	55 ± 1	4 of 4	1.95	Up
S2 cells (growing)	448 ± 20	4 of 4	15.69	Up
Whole fly	28 ± 3	4 of 4

Looking for FBgn0004919. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720