FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0005411 through 18771 annotations produced 1 hits

U2 small nuclear riboprotein auxiliary factor 50 (U2af50):

Annotation Number : CG9998
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005411
Gbrowse : chrX:16250728-16252982 (-) // 100.0 //
Probeset : 1633213_at
Accessions : protein= NP_476891;, nucleotide= NM_057543;
Pathway : via spliceosome // inferred from mutant phenotype /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
FlyMine data for FBgn0005411.
BDGP gene expression has embryonic in situ data for U2af50: 8 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0005411 available for purchase.
VDRC has 3 RNAi stocks for FBgn0005411 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	407 ± 5	4 of 4	0.90	None
Head	308 ± 8	4 of 4	0.70	Down
Eye	414 ± 9	4 of 4	0.89	None
Thoracicoabdominal ganglion	367 ± 10	4 of 4	0.80	Down
Salivary gland	413 ± 4	4 of 4	0.89	None
Crop	525 ± 12	4 of 4	1.10	Up
Midgut	301 ± 18	4 of 4	0.70	Down
Tubule	397 ± 10	4 of 4	0.90	Down
Hindgut	462 ± 13	4 of 4	1.00	None
Heart	274 ± 11	4 of 4	0.59	Down
Fat body	298 ± 43	4 of 4	0.64	Down
Ovary	633 ± 11	4 of 4	1.40	Up
Testis	332 ± 11	4 of 4	0.70	Down
Male accessory glands	566 ± 19	4 of 4	1.20	Up
Virgin spermatheca	580 ± 32	4 of 4	1.26	Up
Mated spermatheca	532 ± 10	4 of 4	1.15	Up
Adult carcass	311 ± 10	4 of 4	0.70	Down
Larval CNS	747 ± 18	4 of 4	1.62	Up
Larval Salivary gland	465 ± 25	4 of 4	1.01	None
Larval midgut	284 ± 14	4 of 4	0.62	Down
Larval tubule	408 ± 3	4 of 4	0.90	None
Larval hindgut	351 ± 16	4 of 4	0.76	Down
Larval fat body	381 ± 22	4 of 4	0.80	Down
Larval trachea	507 ± 52	4 of 4	1.10	None
Larval carcass	234 ± 6	4 of 4	0.51	Down
S2 cells (growing)	667 ± 18	4 of 4	1.44	Up
Whole fly	462 ± 20	4 of 4

Looking for FBgn0005411. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720