FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0005536 through 18771 annotations produced 2 hits

MLC-phosphatase (Mbs):

Annotation Number : CG32156
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005536
Gbrowse : chr3L:16045067-16075130 (+) // 100.0 //
Probeset : 1635238_s_at
Accessions : protein= NP_001097613; /// NP_001097614; /// NP_001097615; /// NP_648830; /// NP_730099; /// NP_730100; /// NP_730101;, nucleotide= NM_001104143; /// NM_001104144; /// NM_001104145; /// NM_140573; /// NM_168646; /// NM_168647; /// NM_168648;
Pathway : 0017023 // myosin phosphatase complex // inferred from sequence or structural similarity /// 0017023 // myosin phosphata
Interpro : 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding //
FlyMine data for FBgn0005536.
BDGP gene expression has embryonic in situ data for Mbs: 14 pix of staining in 5 body parts.
Homophila reports that CG32156 is a close match (8e-12) to human gene HPC1;PRCA1;RNASEL;RNS4 (NP_066956), a gene associated with Prostate cancer 1, 176807, 601518 (3).
BioGrid reports that CG32156 interacts with CG4767 CG4394 CG7809 CG9699 CG9924 CG2248 CG8416 CG8416 CG8416 CG8416 CG9635 CG9774 CG15792 .
TRiP has 2 RNAi stocks for FBgn0005536 available for purchase.
VDRC has 1 RNAi stocks for FBgn0005536 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	417 ± 6	4 of 4	3.40	Up
Head	232 ± 7	4 of 4	1.90	Up
Eye	263 ± 15	4 of 4	2.12	Up
Thoracicoabdominal ganglion	359 ± 14	4 of 4	2.90	Up
Salivary gland	189 ± 12	4 of 4	1.53	Up
Crop	555 ± 25	4 of 4	4.50	Up
Midgut	203 ± 12	4 of 4	1.60	Up
Tubule	120 ± 2	4 of 4	1.00	None
Hindgut	291 ± 7	4 of 4	2.40	Up
Heart	444 ± 29	4 of 4	3.58	Up
Fat body	76 ± 5	4 of 4	0.62	Down
Ovary	49 ± 2	4 of 4	0.40	Down
Testis	46 ± 3	4 of 4	0.40	Down
Male accessory glands	138 ± 1	4 of 4	1.10	None
Virgin spermatheca	91 ± 10	4 of 4	0.73	Down
Mated spermatheca	133 ± 18	4 of 4	1.08	None
Adult carcass	286 ± 30	4 of 4	2.30	Up
Larval CNS	244 ± 13	4 of 4	1.98	Up
Larval Salivary gland	210 ± 12	4 of 4	1.70	Up
Larval midgut	251 ± 10	4 of 4	2.03	Up
Larval tubule	130 ± 5	4 of 4	1.10	None
Larval hindgut	235 ± 6	4 of 4	1.90	Up
Larval fat body	54 ± 2	4 of 4	0.40	Down
Larval trachea	120 ± 2	4 of 4	0.97	None
Larval carcass	397 ± 13	4 of 4	3.21	Up
S2 cells (growing)	277 ± 6	4 of 4	2.24	Up
Whole fly	123 ± 6	4 of 4

MLC-phosphatase (Mbs):

Annotation Number : CG32156
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005536
Gbrowse : chr3L:16066466-16072709 (+) // 100.0 //
Probeset : 1630456_at
Accessions : protein= NP_001097613; /// NP_001097614; /// NP_001097615; /// NP_648830; /// NP_730099; /// NP_730100; /// NP_730101;, nucleotide= NM_001104143; /// NM_001104144; /// NM_001104145; /// NM_140573; /// NM_168646; /// NM_168647; /// NM_168648;
Pathway : 0017023 // myosin phosphatase complex // inferred from sequence or structural similarity /// 0017023 // myosin phosphata
Interpro : 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding //
FlyMine data for FBgn0005536.
BDGP gene expression has embryonic in situ data for Mbs: 14 pix of staining in 5 body parts.
Homophila reports that CG32156 is a close match (8e-12) to human gene HPC1;PRCA1;RNASEL;RNS4 (NP_066956), a gene associated with Prostate cancer 1, 176807, 601518 (3).
BioGrid reports that CG32156 interacts with CG4767 CG4394 CG7809 CG9699 CG9924 CG2248 CG8416 CG8416 CG8416 CG8416 CG9635 CG9774 CG15792 .
TRiP has 2 RNAi stocks for FBgn0005536 available for purchase.
VDRC has 1 RNAi stocks for FBgn0005536 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	225 ± 6	4 of 4	2.50	Up
Head	213 ± 10	4 of 4	2.30	Up
Eye	139 ± 2	4 of 4	1.52	Up
Thoracicoabdominal ganglion	154 ± 5	4 of 4	1.70	Up
Salivary gland	35 ± 3	4 of 4	0.39	Down
Crop	763 ± 14	4 of 4	8.40	Up
Midgut	195 ± 9	4 of 4	2.10	Up
Tubule	66 ± 1	4 of 4	0.70	Down
Hindgut	422 ± 5	4 of 4	4.60	Up
Heart	662 ± 51	4 of 4	7.25	Up
Fat body	56 ± 7	4 of 4	0.61	Down
Ovary	9 ± 1	4 of 4	0.10	Down
Testis	29 ± 1	4 of 4	0.30	Down
Male accessory glands	171 ± 7	4 of 4	1.90	Up
Virgin spermatheca	51 ± 2	4 of 4	0.57	Down
Mated spermatheca	87 ± 15	4 of 4	0.96	None
Adult carcass	265 ± 21	4 of 4	2.90	Up
Larval CNS	71 ± 8	4 of 4	0.79	Down
Larval Salivary gland	30 ± 2	4 of 4	0.33	Down
Larval midgut	95 ± 17	4 of 4	1.04	None
Larval tubule	47 ± 2	4 of 4	0.50	Down
Larval hindgut	200 ± 6	4 of 4	2.19	Up
Larval fat body	22 ± 2	3 of 4	0.20	Down
Larval trachea	14 ± 5	4 of 4	0.16	Down
Larval carcass	202 ± 23	4 of 4	2.21	Up
S2 cells (growing)	15 ± 0	4 of 4	0.17	Down
Whole fly	91 ± 3	4 of 4

Looking for FBgn0005536. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720