FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0005612 through 18771 annotations produced 1 hits

Sox box protein 14 (Sox14):

Annotation Number : CG3090
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005612
Gbrowse : chr2R:19866743-19872700 (+) // 100.0 //
Probeset : 1638050_s_at
Accessions : protein= NP_476894; /// NP_599117;, nucleotide= NM_057546; /// NM_134290;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author sta
Interpro : 0003677 // DNA binding // inferred from electronic annotation /// 0003700 // sequence-specific DNA binding transcription
FlyMine data for FBgn0005612.
Homophila reports that CG3090 is a close match (6e-15) to human gene SOX18;HLTS (NP_060889), a gene associated with Hypotrichosis-lymphedema-telangiectasia syndrome, 607823 (3).
BioGrid reports that CG3090 interacts with CG7171 .
TRiP has 2 RNAi stocks for FBgn0005612 available for purchase.
VDRC has 2 RNAi stocks for FBgn0005612 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	22 ± 2	4 of 4	0.30	Down
Head	78 ± 4	4 of 4	1.10	None
Eye	84 ± 2	4 of 4	1.18	None
Thoracicoabdominal ganglion	27 ± 1	4 of 4	0.40	Down
Salivary gland	99 ± 4	4 of 4	1.40	Up
Crop	102 ± 6	4 of 4	1.40	Up
Midgut	118 ± 6	4 of 4	1.70	Up
Tubule	80 ± 7	4 of 4	1.10	None
Hindgut	88 ± 2	4 of 4	1.20	None
Heart	134 ± 6	4 of 4	1.89	Up
Fat body	173 ± 10	4 of 4	2.43	Up
Ovary	58 ± 2	4 of 4	0.80	None
Testis	22 ± 1	4 of 4	0.30	Down
Male accessory glands	98 ± 8	4 of 4	1.40	Up
Virgin spermatheca	148 ± 7	4 of 4	2.08	Up
Mated spermatheca	129 ± 6	4 of 4	1.82	Up
Adult carcass	148 ± 6	4 of 4	2.10	Up
Larval CNS	62 ± 12	4 of 4	0.87	None
Larval Salivary gland	102 ± 14	4 of 4	1.44	None
Larval midgut	318 ± 68	4 of 4	4.45	Up
Larval tubule	498 ± 19	4 of 4	7.00	Up
Larval hindgut	194 ± 27	4 of 4	2.73	Up
Larval fat body	302 ± 28	4 of 4	4.20	Up
Larval trachea	118 ± 10	4 of 4	1.65	Up
Larval carcass	399 ± 103	4 of 4	5.60	None
S2 cells (growing)	92 ± 4	4 of 4	1.30	Up
Whole fly	71 ± 6	4 of 4

Looking for FBgn0005612. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720