FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0005632 through 18771 annotations produced 3 hits

fat facets (faf):

Annotation Number : CG1945
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005632
Gbrowse : chr3R:27602755-27615753 (+) // 100.0 //
Probeset : 1640541_at
Accessions : protein= NP_524612; /// NP_733455;, nucleotide= NM_079873; /// NM_170576;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific pro
FlyMine data for FBgn0005632.
BDGP gene expression has embryonic in situ data for faf: 9 pix of staining in 5 body parts.
Homophila reports that CG1945 is a close match (0) to human gene DFFRY;USP9Y (NP_004645), a gene associated with Azoospermia, 415000 (3).
BioGrid reports that CG1945 interacts with CG3166 CG9012 CG2275 CG4097 CG4097 CG17077 CG9375 CG9375 CG18102 CG1956 CG17870 CG5553 CG7425 CG7425 CG7425 CG32592 CG8532 CG8532 CG8532 CG8532 .
TRiP has 1 RNAi stocks for FBgn0005632 available for purchase.
VDRC has 5 RNAi stocks for FBgn0005632 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	182 ± 4	4 of 4	1.40	Up
Head	101 ± 3	4 of 4	0.80	Down
Eye	223 ± 21	4 of 4	1.71	Up
Thoracicoabdominal ganglion	130 ± 13	4 of 4	1.00	None
Salivary gland	140 ± 8	4 of 4	1.07	None
Crop	141 ± 6	4 of 4	1.10	None
Midgut	112 ± 1	4 of 4	0.90	Down
Tubule	135 ± 6	4 of 4	1.00	None
Hindgut	129 ± 6	4 of 4	1.00	None
Heart	187 ± 5	4 of 4	1.43	Up
Fat body	90 ± 5	4 of 4	0.69	Down
Ovary	277 ± 6	4 of 4	2.10	Up
Testis	39 ± 2	4 of 4	0.30	Down
Male accessory glands	100 ± 11	4 of 4	0.80	None
Virgin spermatheca	89 ± 8	4 of 4	0.68	Down
Mated spermatheca	79 ± 5	4 of 4	0.61	Down
Adult carcass	70 ± 4	4 of 4	0.50	Down
Larval CNS	140 ± 12	4 of 4	1.07	None
Larval Salivary gland	127 ± 10	4 of 4	0.97	None
Larval midgut	106 ± 8	4 of 4	0.81	None
Larval tubule	146 ± 4	4 of 4	1.10	Up
Larval hindgut	139 ± 4	4 of 4	1.06	None
Larval fat body	100 ± 12	4 of 4	0.80	None
Larval trachea	162 ± 11	4 of 4	1.24	Up
Larval carcass	90 ± 3	4 of 4	0.69	Down
S2 cells (growing)	167 ± 4	4 of 4	1.28	Up
Whole fly	131 ± 3	4 of 4

fat facets (faf):

Annotation Number : CG1945
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005632
Gbrowse : chr3R:27602755-27614032 (+) // 100.0 //
Probeset : 1639083_at
Accessions : protein= NP_524612; /// NP_733455;, nucleotide= NM_079873; /// NM_170576;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific pro
FlyMine data for FBgn0005632.
BDGP gene expression has embryonic in situ data for faf: 9 pix of staining in 5 body parts.
Homophila reports that CG1945 is a close match (0) to human gene DFFRY;USP9Y (NP_004645), a gene associated with Azoospermia, 415000 (3).
BioGrid reports that CG1945 interacts with CG3166 CG9012 CG2275 CG4097 CG4097 CG17077 CG9375 CG9375 CG18102 CG1956 CG17870 CG5553 CG7425 CG7425 CG7425 CG32592 CG8532 CG8532 CG8532 CG8532 .
TRiP has 1 RNAi stocks for FBgn0005632 available for purchase.
VDRC has 5 RNAi stocks for FBgn0005632 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	2 of 4	0.60	Down
Head	22 ± 0	4 of 4	1.10	None
Eye	35 ± 3	4 of 4	1.81	Up
Thoracicoabdominal ganglion	8 ± 1	0 of 4	0.40	Down
Salivary gland	66 ± 8	2 of 4	3.44	Up
Crop	29 ± 1	3 of 4	1.50	Up
Midgut	29 ± 4	3 of 4	1.50	None
Tubule	75 ± 5	4 of 4	3.90	Up
Hindgut	30 ± 2	4 of 4	1.50	Up
Heart	28 ± 3	4 of 4	1.46	None
Fat body	40 ± 7	4 of 4	2.10	Up
Ovary	32 ± 1	4 of 4	1.70	Up
Testis	6 ± 0	1 of 4	0.30	Down
Male accessory glands	16 ± 4	0 of 4	0.80	None
Virgin spermatheca	44 ± 4	4 of 4	2.28	Up
Mated spermatheca	42 ± 1	4 of 4	2.18	Up
Adult carcass	20 ± 6	3 of 4	1.10	None
Larval CNS	26 ± 7	4 of 4	1.36	None
Larval Salivary gland	58 ± 9	4 of 4	3.02	Up
Larval midgut	42 ± 1	4 of 4	2.19	Up
Larval tubule	38 ± 4	4 of 4	2.00	Up
Larval hindgut	51 ± 1	4 of 4	2.64	Up
Larval fat body	41 ± 3	4 of 4	2.10	Up
Larval trachea	36 ± 6	4 of 4	1.86	Up
Larval carcass	38 ± 4	4 of 4	2.00	Up
S2 cells (growing)	54 ± 3	4 of 4	2.79	Up
Whole fly	19 ± 2	4 of 4

fat facets (faf):

Annotation Number : CG1945
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005632
Gbrowse : chr3R:27602755-27614032 (+) // 100.0 //
Probeset : 1634086_a_at
Accessions : protein= NP_524612; /// NP_733455;, nucleotide= NM_079873; /// NM_170576;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0004843 // ubiquitin-specific pro
FlyMine data for FBgn0005632.
BDGP gene expression has embryonic in situ data for faf: 9 pix of staining in 5 body parts.
Homophila reports that CG1945 is a close match (0) to human gene DFFRY;USP9Y (NP_004645), a gene associated with Azoospermia, 415000 (3).
BioGrid reports that CG1945 interacts with CG3166 CG9012 CG2275 CG4097 CG4097 CG17077 CG9375 CG9375 CG18102 CG1956 CG17870 CG5553 CG7425 CG7425 CG7425 CG32592 CG8532 CG8532 CG8532 CG8532 .
TRiP has 1 RNAi stocks for FBgn0005632 available for purchase.
VDRC has 5 RNAi stocks for FBgn0005632 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	77 ± 1	4 of 4	1.20	None
Head	57 ± 8	4 of 4	0.90	None
Eye	119 ± 8	4 of 4	1.78	Up
Thoracicoabdominal ganglion	48 ± 6	4 of 4	0.70	None
Salivary gland	113 ± 6	4 of 4	1.69	Up
Crop	82 ± 6	4 of 4	1.20	None
Midgut	77 ± 3	4 of 4	1.20	None
Tubule	79 ± 2	4 of 4	1.20	Up
Hindgut	72 ± 2	4 of 4	1.10	None
Heart	92 ± 6	4 of 4	1.37	Up
Fat body	46 ± 7	4 of 4	0.69	Down
Ovary	125 ± 3	4 of 4	1.90	Up
Testis	18 ± 1	4 of 4	0.30	Down
Male accessory glands	43 ± 4	4 of 4	0.60	Down
Virgin spermatheca	19 ± 3	4 of 4	0.28	Down
Mated spermatheca	23 ± 1	4 of 4	0.35	Down
Adult carcass	48 ± 3	4 of 4	0.70	Down
Larval CNS	55 ± 6	4 of 4	0.82	None
Larval Salivary gland	57 ± 2	4 of 4	0.85	None
Larval midgut	62 ± 7	4 of 4	0.93	None
Larval tubule	89 ± 2	4 of 4	1.30	Up
Larval hindgut	66 ± 4	4 of 4	0.99	None
Larval fat body	65 ± 7	4 of 4	1.00	None
Larval trachea	81 ± 2	4 of 4	1.20	Up
Larval carcass	56 ± 2	4 of 4	0.84	None
S2 cells (growing)	154 ± 7	4 of 4	2.30	Up
Whole fly	67 ± 4	4 of 4

Looking for FBgn0005632. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720