FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0005666 through 18771 annotations produced 1 hits

Projectin (bt):

Annotation Number : CG32019
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005666
Gbrowse : chr4:745029-796720 (+) // 100.0 //
Probeset : 1626397_at
Accessions : protein= NP_001162825; /// NP_001162826; /// NP_995598;, nucleotide= NM_001169354; /// NM_001169355; /// NM_205876;
Pathway : 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0030018 // Z disc // inferred from direct as
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0005666.
BDGP gene expression has embryonic in situ data for bt: 11 pix of staining in 3 body parts.
Homophila reports that CG32019 is a close match (8e-11) to human gene RP39;USH2A (NP_009054), a gene associated with Retinitis pigmentosa-39, 268000 (3);Usher syndrome, type 2A, 276901 (3).
BioGrid reports that CG32019 interacts with CG4810 CG6163 .
TRiP has 2 RNAi stocks for FBgn0005666 available for purchase.
VDRC has 2 RNAi stocks for FBgn0005666 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 2	4 of 4	0.00	Down
Head	845 ± 17	4 of 4	0.70	None
Eye	113 ± 18	4 of 4	0.10	Down
Thoracicoabdominal ganglion	77 ± 10	4 of 4	0.10	Down
Salivary gland	17 ± 3	1 of 4	0.01	Down
Crop	4100 ± 145	4 of 4	3.60	Up
Midgut	504 ± 16	4 of 4	0.40	Down
Tubule	66 ± 6	4 of 4	0.10	Down
Hindgut	1923 ± 15	4 of 4	1.70	Up
Heart	1441 ± 122	4 of 4	1.26	None
Fat body	95 ± 31	4 of 4	0.08	Down
Ovary	65 ± 1	4 of 4	0.10	Down
Testis	239 ± 14	4 of 4	0.20	Down
Male accessory glands	974 ± 67	4 of 4	0.90	None
Virgin spermatheca	119 ± 12	4 of 4	0.10	Down
Mated spermatheca	217 ± 33	4 of 4	0.19	Down
Adult carcass	2888 ± 139	4 of 4	2.50	Up
Larval CNS	38 ± 3	4 of 4	0.03	Down
Larval Salivary gland	19 ± 3	4 of 4	0.02	Down
Larval midgut	418 ± 17	4 of 4	0.37	Down
Larval tubule	43 ± 4	4 of 4	0.00	Down
Larval hindgut	2229 ± 115	4 of 4	1.95	Up
Larval fat body	213 ± 28	4 of 4	0.20	Down
Larval trachea	388 ± 217	4 of 4	0.34	Down
Larval carcass	4875 ± 367	4 of 4	4.26	Up
S2 cells (growing)	5 ± 0	1 of 4	0.00	Down
Whole fly	1145 ± 157	4 of 4

Looking for FBgn0005666. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720