FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0005694 through 18771 annotations produced 1 hits

Adh enhancer factor 1 (Aef1):

Annotation Number : CG5683
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005694
Gbrowse : chr3L:21426540-21431271 (+) // 100.0 //
Probeset : 1624248_s_at
Accessions : protein= NP_524200; /// NP_730630; /// NP_730631;, nucleotide= NM_079476; /// NM_168903; /// NM_168904;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // non-traceable author statement
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003677 // DNA binding // inferred from elect
FlyMine data for FBgn0005694.
BDGP gene expression has embryonic in situ data for Aef1: 8 pix of staining in 1 body parts.
Homophila reports that CG5683 is a close match (3e-11) to human gene BCD1;COPEB;KLF6;ZF9 (NP_001291), a gene associated with Gastric cancer, somatic, 137215 (3);Prostate cancer, somatic, 176807 (3).
BioGrid reports that CG5683 interacts with CG9986 .
TRiP has 1 RNAi stocks for FBgn0005694 available for purchase.
VDRC has 3 RNAi stocks for FBgn0005694 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	207 ± 4	4 of 4	6.10	Up
Head	79 ± 6	4 of 4	2.30	Up
Eye	77 ± 3	4 of 4	2.28	Up
Thoracicoabdominal ganglion	144 ± 2	4 of 4	4.30	Up
Salivary gland	114 ± 11	4 of 4	3.36	Up
Crop	67 ± 3	4 of 4	2.00	Up
Midgut	53 ± 3	4 of 4	1.60	None
Tubule	36 ± 2	4 of 4	1.10	None
Hindgut	55 ± 3	4 of 4	1.60	Up
Heart	43 ± 2	4 of 4	1.28	None
Fat body	95 ± 6	4 of 4	2.82	Up
Ovary	32 ± 3	4 of 4	1.00	None
Testis	15 ± 2	4 of 4	0.40	None
Male accessory glands	66 ± 3	4 of 4	2.00	Up
Virgin spermatheca	43 ± 1	4 of 4	1.27	None
Mated spermatheca	40 ± 2	4 of 4	1.18	None
Adult carcass	53 ± 3	4 of 4	1.60	Up
Larval CNS	119 ± 7	4 of 4	3.53	Up
Larval Salivary gland	87 ± 2	4 of 4	2.59	Up
Larval midgut	41 ± 3	4 of 4	1.22	None
Larval tubule	43 ± 1	4 of 4	1.30	None
Larval hindgut	48 ± 4	4 of 4	1.44	None
Larval fat body	36 ± 3	4 of 4	1.10	None
Larval trachea	53 ± 5	4 of 4	1.57	None
Larval carcass	68 ± 4	4 of 4	2.02	Up
S2 cells (growing)	85 ± 2	4 of 4	2.53	Up
Whole fly	33 ± 6	4 of 4

Looking for FBgn0005694. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720