Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0005771 through 18771 annotations produced 1 hits



Scutoid (noc):

Annotation Number : CG4491
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0005771
Gbrowse : chr2L:14490861-14494019 (+) // 100.0 //
Probeset : 1625960_at
Accessions : protein= NP_476917;, nucleotide= NM_057569;
Pathway : open tracheal system // inferred from mutant phenotype /// 0008056 // ocellus development // inferred from mutant pheno
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or stru
FlyMine data for FBgn0005771.
BDGP gene expression has embryonic in situ data for noc: 73 pix of staining in 23 body parts.
BioGrid reports that CG4491 interacts with CG4491 CG4220 CG4220 CG7021 .
TRiP has 1 RNAi stocks for FBgn0005771 available for purchase.
VDRC has 1 RNAi stocks for FBgn0005771 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain837 234 of 4 3.80Up
Head621 444 of 4 2.80Up
Eye446 74 of 4 2.04Up
Thoracicoabdominal ganglion1018 304 of 4 4.70Up
Salivary gland1293 154 of 4 5.90Up
Crop824 254 of 4 3.80Up
Midgut302 54 of 4 1.40Up
Tubule256 364 of 4 1.20None
Hindgut813 214 of 4 3.70Up
Heart252 74 of 4 1.15None
Fat body590 544 of 4 2.70Up
Ovary44 14 of 4 0.20Down
Testis31 14 of 4 0.10Down
Male accessory glands25 34 of 4 0.10Down
Virgin spermatheca471 324 of 4 2.15Up
Mated spermatheca482 274 of 4 2.20Up
Adult carcass414 154 of 4 1.90Up
Larval CNS1330 1624 of 4 6.07Up
Larval Salivary gland346 354 of 4 1.58Up
Larval midgut339 184 of 4 1.55Up
Larval tubule573 264 of 4 2.60Up
Larval hindgut533 104 of 4 2.43Up
Larval fat body930 654 of 4 4.20Up
Larval trachea1288 1404 of 4 5.88Up
Larval carcass592 214 of 4 2.70Up
S2 cells (growing)6 04 of 4 0.03Down
Whole fly219 154 of 4

Looking for FBgn0005771. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime