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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0010044 through 18771 annotations produced 1 hits



Glutathione S transferase D8 (GstD8):

Annotation Number : CG4421
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010044
Gbrowse : chr3R:8205757-8206396 (+) // 100.0 //
Probeset : 1634554_at
Accessions : protein= NP_524916;, nucleotide= NM_080177;
Interpro : 0004364 // glutathione transferase activity // inferred from sequence or structural similarity /// 0004364 // glutathion
FlyMine data for FBgn0010044.
VDRC has 5 RNAi stocks for FBgn0010044 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 00 of 4 0.50None
Head33 14 of 4 3.90Up
Eye7 01 of 4 0.83None
Thoracicoabdominal ganglion4 10 of 4 0.50None
Salivary gland14 30 of 4 1.69None
Crop2 00 of 4 0.30Down
Midgut104 44 of 412.10Up
Tubule6 10 of 4 0.80None
Hindgut9 11 of 4 1.20None
Heart4 10 of 4 0.56None
Fat body9 10 of 4 1.08None
Ovary4 10 of 4 0.60None
Testis4 10 of 4 0.50Down
Male accessory glands13 31 of 4 1.50None
Virgin spermatheca7 10 of 4 0.82None
Mated spermatheca6 10 of 4 0.79None
Adult carcass20 41 of 4 2.40None
Larval CNS4 10 of 4 0.55Down
Larval Salivary gland6 00 of 4 0.76None
Larval midgut36 43 of 4 4.31Up
Larval tubule7 20 of 4 0.90None
Larval hindgut10 11 of 4 1.21None
Larval fat body11 40 of 4 1.30None
Larval trachea21 44 of 4 2.52Up
Larval carcass11 23 of 4 1.37None
S2 cells (growing)8 10 of 4 0.93None
Whole fly8 11 of 4

Looking for FBgn0010044. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime