Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0010295 through 18771 annotations produced 1 hits



new glue 3 (ng3):

Annotation Number : CG10788
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010295
Gbrowse : chrX:3135523-3136117 (-) // 100.0 //
Probeset : 1625294_at
Accessions : protein= NP_525060;, nucleotide= NM_080321;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from e
Interpro : 0005198 // structural molecule activity // non-traceable author statement
FlyMine data for FBgn0010295.
VDRC has 2 RNAi stocks for FBgn0010295 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 02 of 4 1.90None
Head4 ± 10 of 4 1.50None
Eye5 ± 10 of 4 2.13None
Thoracicoabdominal ganglion4 ± 10 of 4 1.50None
Salivary gland12 ± 10 of 4 4.63Up
Crop3 ± 10 of 4 1.20None
Midgut4 ± 20 of 4 1.80None
Tubule5 ± 10 of 4 1.90None
Hindgut4 ± 10 of 4 1.50None
Heart1 ± 00 of 4 0.73None
Fat body11 ± 50 of 4 4.29Up
Ovary1 ± 00 of 4 0.60None
Testis6 ± 01 of 4 2.50Up
Male accessory glands7 ± 20 of 4 2.80None
Virgin spermatheca10 ± 10 of 4 3.84Up
Mated spermatheca7 ± 30 of 4 2.70None
Adult carcass8 ± 50 of 4 3.30None
Larval CNS3 ± 10 of 4 1.34None
Larval Salivary gland8776 ± 4804 of 43311.84Up
Larval midgut5 ± 20 of 4 1.91None
Larval tubule6 ± 10 of 4 2.60None
Larval hindgut3 ± 00 of 4 1.18None
Larval fat body9 ± 30 of 4 3.70None
Larval trachea89 ± 1422 of 433.64None
Larval carcass3 ± 00 of 4 1.33None
S2 cells (growing)6 ± 10 of 4 2.35None
Whole fly2 ± 00 of 4

Looking for FBgn0010295. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime