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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0010323 through 18771 annotations produced 1 hits



Muenster 72 (Gsc):

Annotation Number : CG2851
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010323
Gbrowse : chr2L:583543-594687 (-) // 99.83 //
Probeset : 1630801_at
Accessions : protein= NP_001137762; /// NP_476949;, nucleotide= NM_001144290; /// NM_057601;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0006355 // regulation of transcription
Interpro : DNA-dependent // inferred from electronic annotation /// 0007275 // multicellular organismal development // inferred fr
FlyMine data for FBgn0010323.
Homophila reports that CG2851 is a close match (5e-12) to human gene KPD;MODY9;PAX4 (NP_006184), a gene associated with Diabetes mellitus, type 2, 125853 (3);Maturity-onset diabetes of the young, type IX, 612225 (3).
BioGrid reports that CG2851 interacts with CG3528 CG3651 CG4482 CG4617 CG8384 CG9568 .
TRiP has 1 RNAi stocks for FBgn0010323 available for purchase.
VDRC has 1 RNAi stocks for FBgn0010323 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain17 14 of 4 3.60Up
Head10 23 of 4 2.10None
Eye4 00 of 4 0.84None
Thoracicoabdominal ganglion5 11 of 4 1.20None
Salivary gland11 21 of 4 2.29None
Crop3 10 of 4 0.70None
Midgut5 10 of 4 1.10None
Tubule4 00 of 4 0.80None
Hindgut6 11 of 4 1.30None
Heart3 10 of 4 0.69None
Fat body11 13 of 4 2.21Up
Ovary1 00 of 4 0.40None
Testis3 10 of 4 0.70None
Male accessory glands4 30 of 4 1.00None
Virgin spermatheca3 10 of 4 0.69None
Mated spermatheca6 00 of 4 1.31None
Adult carcass4 10 of 4 0.80None
Larval CNS37 74 of 4 7.59Up
Larval Salivary gland7 20 of 4 1.55None
Larval midgut4 10 of 4 0.82None
Larval tubule6 01 of 4 1.30None
Larval hindgut5 11 of 4 1.12None
Larval fat body5 00 of 4 1.10None
Larval trachea2 20 of 4 0.55None
Larval carcass6 10 of 4 1.27None
S2 cells (growing)2 00 of 4 0.41None
Whole fly5 10 of 4

Looking for FBgn0010323. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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