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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0010391 through 18771 annotations produced 1 hits



GTP-binding protein (Gtp-bp):

Annotation Number : CG2522
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010391
Gbrowse : chrX:11020907-11023136 (-) // 100.0 //
Probeset : 1639135_at
Accessions : protein= NP_524887;, nucleotide= NM_080148;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005785 // signal recognition particle recep
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003723 // RNA binding // non-traceable author
FlyMine data for FBgn0010391.
BDGP gene expression has embryonic in situ data for Gtp-bp: 17 pix of staining in 16 body parts.
BioGrid reports that CG2522 interacts with CG33017 CG3758 CG8155 .
TRiP has 1 RNAi stocks for FBgn0010391 available for purchase.
VDRC has 1 RNAi stocks for FBgn0010391 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain258 124 of 4 0.70Down
Head344 174 of 4 0.90None
Eye278 304 of 4 0.71Down
Thoracicoabdominal ganglion338 84 of 4 0.90None
Salivary gland2687 214 of 4 6.88Up
Crop464 214 of 4 1.20None
Midgut560 204 of 4 1.40Up
Tubule293 394 of 4 0.80Down
Hindgut402 54 of 4 1.00None
Heart375 284 of 4 0.96None
Fat body578 354 of 4 1.48Up
Ovary434 64 of 4 1.10None
Testis115 64 of 4 0.30Down
Male accessory glands2013 594 of 4 5.20Up
Virgin spermatheca696 354 of 4 1.78Up
Mated spermatheca931 474 of 4 2.38Up
Adult carcass455 274 of 4 1.20None
Larval CNS338 344 of 4 0.87None
Larval Salivary gland2696 1664 of 4 6.90Up
Larval midgut469 174 of 4 1.20Up
Larval tubule337 194 of 4 0.90None
Larval hindgut525 124 of 4 1.35Up
Larval fat body412 534 of 4 1.10None
Larval trachea786 464 of 4 2.01Up
Larval carcass697 274 of 4 1.79Up
S2 cells (growing)817 274 of 4 2.09Up
Whole fly390 214 of 4

Looking for FBgn0010391. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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