FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0010399 through 18771 annotations produced 1 hits

NMDA receptor (Nmdar1):

Annotation Number : CG2902
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010399
Gbrowse : chr3R:1334543-1349046 (-) // 100.0 //
Probeset : 1641697_at
Accessions : protein= NP_730940;, nucleotide= NM_169059;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0014069 // postsynaptic density // inferred from e
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activit
FlyMine data for FBgn0010399.
BDGP gene expression has embryonic in situ data for Nmdar1: 15 pix of staining in 4 body parts.
Homophila reports that CG2902 is a close match (3e-51) to human gene GLUR3;GRIA3;MRX94 (NP_015564), a gene associated with Mental retardation, X-linked 94, 300699 (3).
TRiP has 3 RNAi stocks for FBgn0010399 available for purchase.
VDRC has 3 RNAi stocks for FBgn0010399 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	330 ± 23	4 of 4	42.50	Up
Head	67 ± 8	4 of 4	8.70	Up
Eye	12 ± 2	4 of 4	1.57	None
Thoracicoabdominal ganglion	319 ± 4	4 of 4	41.00	Up
Salivary gland	3 ± 1	0 of 4	0.45	None
Crop	4 ± 1	1 of 4	0.50	None
Midgut	0 ± 0	0 of 4	0.10	Down
Tubule	4 ± 0	1 of 4	0.60	Down
Hindgut	3 ± 1	0 of 4	0.50	Down
Heart	0 ± 0	0 of 4	0.07	Down
Fat body	7 ± 2	3 of 4	0.95	None
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	2 ± 0	0 of 4	0.30	Down
Male accessory glands	6 ± 1	1 of 4	0.80	None
Virgin spermatheca	8 ± 1	2 of 4	1.11	None
Mated spermatheca	5 ± 2	1 of 4	0.73	None
Adult carcass	4 ± 1	0 of 4	0.60	None
Larval CNS	192 ± 15	4 of 4	24.75	Up
Larval Salivary gland	4 ± 0	0 of 4	0.61	None
Larval midgut	2 ± 1	0 of 4	0.28	Down
Larval tubule	4 ± 1	1 of 4	0.60	None
Larval hindgut	2 ± 0	0 of 4	0.26	Down
Larval fat body	5 ± 1	0 of 4	0.70	None
Larval trachea	0 ± 0	0 of 4	0.10	Down
Larval carcass	3 ± 0	1 of 4	0.45	Down
S2 cells (growing)	0 ± 0	0 of 4	0.12	Down
Whole fly	7 ± 0	4 of 4

Looking for FBgn0010399. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720