FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0010415 through 18771 annotations produced 1 hits

Syndecan (Sdc):

Annotation Number : CG10497
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010415
Gbrowse : chr2R:17281121-17368673 (-) // 100.0 //
Probeset : 1631931_s_at
Accessions : protein= NP_001137728; /// NP_001137729; /// NP_001163238; /// NP_476965; /// NP_726071; /// NP_726072;, nucleotide= NM_001144256; /// NM_001144257; /// NM_001169767; /// NM_057617; /// NM_166449; /// NM_166450;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0005886 // plasma membrane // inferred from sequen
Interpro : 0004888 // transmembrane receptor activity // inferred from sequence or structural similarity /// 0005515 // protein bin
FlyMine data for FBgn0010415.
BDGP gene expression has embryonic in situ data for Sdc: 22 pix of staining in 41 body parts.
BioGrid reports that CG10497 interacts with CG1057 .
VDRC has 1 RNAi stocks for FBgn0010415 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1163 ± 12	4 of 4	3.20	Up
Head	661 ± 42	4 of 4	1.80	Up
Eye	680 ± 20	4 of 4	1.90	Up
Thoracicoabdominal ganglion	1099 ± 37	4 of 4	3.10	Up
Salivary gland	379 ± 15	4 of 4	1.06	None
Crop	1056 ± 31	4 of 4	3.00	Up
Midgut	280 ± 4	4 of 4	0.80	None
Tubule	337 ± 9	4 of 4	0.90	Down
Hindgut	863 ± 22	4 of 4	2.40	Up
Heart	1318 ± 65	4 of 4	3.68	Up
Fat body	1644 ± 187	4 of 4	4.60	Up
Ovary	270 ± 7	4 of 4	0.80	None
Testis	160 ± 11	4 of 4	0.40	Down
Male accessory glands	313 ± 7	4 of 4	0.90	None
Virgin spermatheca	1923 ± 107	4 of 4	5.37	Up
Mated spermatheca	1731 ± 175	4 of 4	4.84	Up
Adult carcass	693 ± 19	4 of 4	1.90	Up
Larval CNS	866 ± 28	4 of 4	2.42	Up
Larval Salivary gland	285 ± 15	4 of 4	0.80	None
Larval midgut	332 ± 16	4 of 4	0.93	None
Larval tubule	274 ± 10	4 of 4	0.80	None
Larval hindgut	791 ± 10	4 of 4	2.21	Up
Larval fat body	3373 ± 309	4 of 4	9.40	Up
Larval trachea	552 ± 17	4 of 4	1.54	Up
Larval carcass	566 ± 6	4 of 4	1.58	Up
S2 cells (growing)	278 ± 5	4 of 4	0.78	None
Whole fly	358 ± 31	4 of 4

Looking for FBgn0010415. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720