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FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0010531 through 18771 annotations produced 1 hits



CCS (CCS):

Annotation Number : CG17753
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010531
Gbrowse : chr2R:6008435-6010067 (-) // 100.0 //
Probeset : 1627698_at
Accessions : protein= NP_001163108; /// NP_652029;, nucleotide= NM_001169637; /// NM_143772;
Interpro : 0004784 // superoxide dismutase activity // inferred from electronic annotation /// 0016491 // oxidoreductase activity /
FlyMine data for FBgn0010531.
Homophila reports that CG17753 is a close match (8e-16) to human gene SOD3 (NP_003093), a gene associated with [Superoxide dismutase, elevated extracellular] (3).
BioGrid reports that CG17753 interacts with CG30084 .
VDRC has 2 RNAi stocks for FBgn0010531 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 ± 14 of 4 0.80None
Head11 ± 13 of 4 0.80None
Eye24 ± 24 of 4 1.69Up
Thoracicoabdominal ganglion15 ± 14 of 4 1.10None
Salivary gland24 ± 43 of 4 1.69None
Crop21 ± 24 of 4 1.40None
Midgut19 ± 24 of 4 1.30None
Tubule20 ± 24 of 4 1.40Up
Hindgut16 ± 14 of 4 1.10None
Heart17 ± 04 of 4 1.17None
Fat body20 ± 44 of 4 1.37None
Ovary40 ± 24 of 4 2.70Up
Testis11 ± 04 of 4 0.80None
Male accessory glands21 ± 14 of 4 1.50Up
Virgin spermatheca12 ± 03 of 4 0.84None
Mated spermatheca12 ± 14 of 4 0.88None
Adult carcass18 ± 23 of 4 1.20None
Larval CNS33 ± 34 of 4 2.30Up
Larval Salivary gland21 ± 14 of 4 1.44Up
Larval midgut11 ± 12 of 4 0.77None
Larval tubule26 ± 34 of 4 1.80Up
Larval hindgut15 ± 04 of 4 1.07None
Larval fat body16 ± 23 of 4 1.10None
Larval trachea18 ± 34 of 4 1.28None
Larval carcass12 ± 14 of 4 0.84None
S2 cells (growing)10 ± 13 of 4 0.73None
Whole fly14 ± 14 of 4

Looking for FBgn0010531. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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