Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0010612 through 18771 annotations produced 1 hits



chr2L:10975532-10976359 (-) // 100.0 // (lethal (2) 06225):

Annotation Number : CG6105
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1629647_at
Accessions : protein= , nucleotide= NP_001036353; /// NP_001036354; /// NP_652035; /// NP_731748;
Pathway : 0015986 // ATP synthesis coupled proton transport // inferred from electronic annotation /// 0015992 // proton transport
Interpro : "0000276 // mitochondrial proton-transporting ATP synthase complex
FlyMine data for full length.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2081 764 of 4 0.80Down
Head2717 1014 of 4 1.10None
Eye3566 764 of 4 1.45Up
Thoracicoabdominal ganglion2994 744 of 4 1.20Up
Salivary gland4042 934 of 4 1.64Up
Crop2415 1394 of 4 1.00None
Midgut2490 1114 of 4 1.00None
Tubule2501 664 of 4 1.00None
Hindgut3508 1184 of 4 1.40Up
Heart3790 2314 of 4 1.54Up
Fat body3396 3594 of 4 1.38Up
Ovary1425 184 of 4 0.60Down
Testis724 84 of 4 0.30Down
Male accessory glands2196 814 of 4 0.90Down
Virgin spermatheca2055 614 of 4 0.84Down
Mated spermatheca1997 454 of 4 0.81Down
Adult carcass4958 3054 of 4 2.00Up
Larval CNS1653 804 of 4 0.67Down
Larval Salivary gland3168 984 of 4 1.29Up
Larval midgut2593 574 of 4 1.06None
Larval tubule1884 2214 of 4 0.80None
Larval hindgut3072 814 of 4 1.25Up
Larval fat body761 654 of 4 0.30Down
Larval trachea2347 614 of 4 0.95None
Larval carcass2802 2594 of 4 1.14None
S2 cells (growing)1368 44 of 4 0.56Down
Whole fly2458 554 of 4

Looking for FBgn0010612. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime