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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0010772 through 18771 annotations produced 1 hits



Xe7 (Xe7):

Annotation Number : CG2179
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010772
Gbrowse : chr3R:1491168-1495051 (-) // 100.0 //
Probeset : 1632858_a_at
Accessions : protein= NP_649572; /// NP_730984;, nucleotide= NM_141315; /// NM_169093;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0010772.
BioGrid reports that CG2179 interacts with CG5838 .
VDRC has 1 RNAi stocks for FBgn0010772 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain709 ± 374 of 4 6.10Up
Head164 ± 64 of 4 1.40Up
Eye256 ± 74 of 4 2.18Up
Thoracicoabdominal ganglion568 ± 244 of 4 4.90Up
Salivary gland259 ± 54 of 4 2.22Up
Crop168 ± 54 of 4 1.40Up
Midgut133 ± 104 of 4 1.10None
Tubule146 ± 54 of 4 1.20Up
Hindgut164 ± 94 of 4 1.40Up
Heart134 ± 64 of 4 1.14None
Fat body120 ± 104 of 4 1.03None
Ovary156 ± 54 of 4 1.30Up
Testis70 ± 34 of 4 0.60Down
Male accessory glands179 ± 94 of 4 1.50Up
Virgin spermatheca197 ± 134 of 4 1.68Up
Mated spermatheca176 ± 84 of 4 1.51Up
Adult carcass164 ± 94 of 4 1.40Up
Larval CNS290 ± 94 of 4 2.47Up
Larval Salivary gland253 ± 244 of 4 2.16Up
Larval midgut77 ± 44 of 4 0.66Down
Larval tubule165 ± 34 of 4 1.40Up
Larval hindgut107 ± 24 of 4 0.91None
Larval fat body201 ± 144 of 4 1.70Up
Larval trachea185 ± 194 of 4 1.58Up
Larval carcass140 ± 84 of 4 1.20None
S2 cells (growing)188 ± 24 of 4 1.60Up
Whole fly117 ± 54 of 4

Looking for FBgn0010772. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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