FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0010774 through 18771 annotations produced 3 hits

Aly (Aly):

Annotation Number : CG1101
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010774
Gbrowse : chr3R:2903617-2906126 (-) // 100.0 //
Probeset : 1640178_at
Accessions : protein= NP_651968;, nucleotide= NM_143711;
Pathway : via spliceosome // inferred by curator"
Interpro : 0005654 // nucleoplasm // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0
FlyMine data for FBgn0010774.
BDGP gene expression has embryonic in situ data for Aly: 4 pix of staining in 1 body parts.
BioGrid reports that CG1101 interacts with CG17003 CG18259 CG1978 CG9775 .
TRiP has 1 RNAi stocks for FBgn0010774 available for purchase.
VDRC has 2 RNAi stocks for FBgn0010774 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	543 ± 10	4 of 4	0.80	Down
Head	420 ± 12	4 of 4	0.60	Down
Eye	429 ± 16	4 of 4	0.61	Down
Thoracicoabdominal ganglion	388 ± 9	4 of 4	0.60	Down
Salivary gland	266 ± 8	4 of 4	0.38	Down
Crop	358 ± 9	4 of 4	0.50	Down
Midgut	322 ± 16	4 of 4	0.50	Down
Tubule	404 ± 25	4 of 4	0.60	Down
Hindgut	406 ± 4	4 of 4	0.60	Down
Heart	294 ± 8	4 of 4	0.42	Down
Fat body	500 ± 26	4 of 4	0.71	Down
Ovary	1283 ± 17	4 of 4	1.80	Up
Testis	479 ± 12	4 of 4	0.70	Down
Male accessory glands	262 ± 8	4 of 4	0.40	Down
Virgin spermatheca	467 ± 22	4 of 4	0.66	Down
Mated spermatheca	496 ± 23	4 of 4	0.71	Down
Adult carcass	351 ± 13	4 of 4	0.50	Down
Larval CNS	1092 ± 48	4 of 4	1.55	Up
Larval Salivary gland	802 ± 44	4 of 4	1.14	None
Larval midgut	295 ± 5	4 of 4	0.42	Down
Larval tubule	659 ± 9	4 of 4	0.90	None
Larval hindgut	535 ± 8	4 of 4	0.76	Down
Larval fat body	814 ± 36	4 of 4	1.20	Up
Larval trachea	642 ± 42	4 of 4	0.91	None
Larval carcass	492 ± 16	4 of 4	0.70	Down
S2 cells (growing)	727 ± 6	4 of 4	1.03	None
Whole fly	704 ± 19	4 of 4

Aly (Aly):

Annotation Number : CG1101
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010774
Gbrowse : chr3R:2905385-2906126 (-) // 100.0 //
Probeset : 1630198_at
Accessions : protein= NP_651968;, nucleotide= NM_143711;
Pathway : via spliceosome // inferred by curator"
Interpro : 0005654 // nucleoplasm // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0
FlyMine data for FBgn0010774.
BDGP gene expression has embryonic in situ data for Aly: 4 pix of staining in 1 body parts.
BioGrid reports that CG1101 interacts with CG17003 CG18259 CG1978 CG9775 .
TRiP has 1 RNAi stocks for FBgn0010774 available for purchase.
VDRC has 2 RNAi stocks for FBgn0010774 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	86 ± 0	4 of 4	2.60	Up
Head	32 ± 3	4 of 4	1.00	None
Eye	39 ± 2	4 of 4	1.20	None
Thoracicoabdominal ganglion	52 ± 7	4 of 4	1.60	None
Salivary gland	37 ± 5	4 of 4	1.16	None
Crop	44 ± 3	4 of 4	1.40	None
Midgut	41 ± 3	4 of 4	1.30	None
Tubule	11 ± 0	0 of 4	0.30	Down
Hindgut	35 ± 3	4 of 4	1.10	None
Heart	16 ± 4	3 of 4	0.51	Down
Fat body	28 ± 12	2 of 4	0.88	None
Ovary	45 ± 2	4 of 4	1.40	Up
Testis	15 ± 2	4 of 4	0.50	Down
Male accessory glands	29 ± 3	3 of 4	0.90	None
Virgin spermatheca	6 ± 1	1 of 4	0.21	Down
Mated spermatheca	4 ± 1	0 of 4	0.14	Down
Adult carcass	47 ± 1	4 of 4	1.50	Up
Larval CNS	47 ± 2	4 of 4	1.45	Up
Larval Salivary gland	32 ± 5	4 of 4	0.99	None
Larval midgut	12 ± 1	0 of 4	0.39	Down
Larval tubule	34 ± 2	4 of 4	1.10	None
Larval hindgut	16 ± 1	3 of 4	0.51	Down
Larval fat body	70 ± 3	4 of 4	2.20	Up
Larval trachea	31 ± 3	4 of 4	0.97	None
Larval carcass	16 ± 3	3 of 4	0.51	Down
S2 cells (growing)	70 ± 4	4 of 4	2.16	Up
Whole fly	32 ± 4	4 of 4

Aly (Aly):

Annotation Number : CG1101
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010774
Gbrowse : chr3R:2905385-2906126 (-) // 100.0 //
Probeset : 1634966_a_at
Accessions : protein= NP_651968;, nucleotide= NM_143711;
Pathway : via spliceosome // inferred by curator"
Interpro : 0005654 // nucleoplasm // inferred from direct assay /// 0031965 // nuclear membrane // inferred from direct assay /// 0
FlyMine data for FBgn0010774.
BDGP gene expression has embryonic in situ data for Aly: 4 pix of staining in 1 body parts.
BioGrid reports that CG1101 interacts with CG17003 CG18259 CG1978 CG9775 .
TRiP has 1 RNAi stocks for FBgn0010774 available for purchase.
VDRC has 2 RNAi stocks for FBgn0010774 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	170 ± 6	4 of 4	0.70	Down
Head	71 ± 7	4 of 4	0.30	Down
Eye	90 ± 9	4 of 4	0.35	Down
Thoracicoabdominal ganglion	89 ± 6	4 of 4	0.30	Down
Salivary gland	66 ± 10	4 of 4	0.26	Down
Crop	120 ± 12	4 of 4	0.50	Down
Midgut	119 ± 1	4 of 4	0.50	Down
Tubule	32 ± 3	4 of 4	0.10	Down
Hindgut	129 ± 3	4 of 4	0.50	Down
Heart	85 ± 15	4 of 4	0.33	Down
Fat body	96 ± 42	4 of 4	0.38	Down
Ovary	533 ± 14	4 of 4	2.10	Up
Testis	103 ± 3	4 of 4	0.40	Down
Male accessory glands	79 ± 4	4 of 4	0.30	Down
Virgin spermatheca	22 ± 1	4 of 4	0.09	Down
Mated spermatheca	21 ± 1	3 of 4	0.08	Down
Adult carcass	84 ± 5	4 of 4	0.30	Down
Larval CNS	355 ± 35	4 of 4	1.38	Up
Larval Salivary gland	195 ± 24	4 of 4	0.76	None
Larval midgut	94 ± 3	4 of 4	0.37	Down
Larval tubule	228 ± 11	4 of 4	0.90	None
Larval hindgut	145 ± 3	4 of 4	0.56	Down
Larval fat body	357 ± 15	4 of 4	1.40	Up
Larval trachea	199 ± 21	4 of 4	0.78	Down
Larval carcass	123 ± 1	4 of 4	0.48	Down
S2 cells (growing)	326 ± 5	4 of 4	1.27	Up
Whole fly	256 ± 15	4 of 4

Looking for FBgn0010774. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720