FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0010905 through 18771 annotations produced 4 hits

d-spinophilin (Spn):

Annotation Number : CG16757
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010905
Gbrowse : chr3L:2508119-2554277 (-) // 100.0 //
Probeset : 1630417_at
Accessions : protein= NP_536777;, nucleotide= NM_080516;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008157 // protein phosphatase 1 binding // inferr
FlyMine data for FBgn0010905.
VDRC has 2 RNAi stocks for FBgn0010905 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	88 ± 3	4 of 4	1.80	Up
Head	24 ± 2	4 of 4	0.50	Down
Eye	45 ± 4	4 of 4	0.90	None
Thoracicoabdominal ganglion	74 ± 13	4 of 4	1.50	None
Salivary gland	12 ± 3	1 of 4	0.26	Down
Crop	24 ± 2	4 of 4	0.50	Down
Midgut	39 ± 4	4 of 4	0.80	None
Tubule	126 ± 2	4 of 4	2.50	Up
Hindgut	20 ± 1	4 of 4	0.40	Down
Heart	14 ± 1	4 of 4	0.28	Down
Fat body	12 ± 1	2 of 4	0.24	Down
Ovary	165 ± 1	4 of 4	3.30	Up
Testis	12 ± 0	4 of 4	0.30	Down
Male accessory glands	14 ± 3	2 of 4	0.30	Down
Virgin spermatheca	25 ± 1	4 of 4	0.50	Down
Mated spermatheca	24 ± 3	4 of 4	0.49	Down
Adult carcass	15 ± 2	1 of 4	0.30	Down
Larval CNS	36 ± 5	4 of 4	0.73	Down
Larval Salivary gland	32 ± 1	4 of 4	0.65	Down
Larval midgut	30 ± 2	4 of 4	0.60	Down
Larval tubule	37 ± 3	4 of 4	0.70	Down
Larval hindgut	22 ± 1	4 of 4	0.45	Down
Larval fat body	100 ± 13	4 of 4	2.00	Up
Larval trachea	14 ± 2	4 of 4	0.28	Down
Larval carcass	17 ± 1	3 of 4	0.35	Down
S2 cells (growing)	72 ± 4	4 of 4	1.45	Up
Whole fly	50 ± 3	4 of 4

():

Annotation Number : HL02501
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chr3L:2506560-2507952 (-) // 99.43 //
Probeset : 1624313_at
Accessions : protein= , nucleotide=

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	369 ± 19	4 of 4	23.40	Up
Head	67 ± 7	4 of 4	4.30	Up
Eye	156 ± 13	4 of 4	9.94	Up
Thoracicoabdominal ganglion	366 ± 28	4 of 4	23.30	Up
Salivary gland	15 ± 2	0 of 4	0.96	None
Crop	11 ± 0	4 of 4	0.70	None
Midgut	21 ± 2	4 of 4	1.40	None
Tubule	17 ± 0	2 of 4	1.10	Up
Hindgut	10 ± 0	3 of 4	0.60	None
Heart	9 ± 2	0 of 4	0.59	None
Fat body	16 ± 1	0 of 4	1.06	None
Ovary	8 ± 0	4 of 4	0.60	None
Testis	2 ± 0	0 of 4	0.20	Down
Male accessory glands	13 ± 4	0 of 4	0.80	None
Virgin spermatheca	16 ± 1	1 of 4	1.02	None
Mated spermatheca	21 ± 5	1 of 4	1.34	None
Adult carcass	13 ± 4	0 of 4	0.80	None
Larval CNS	180 ± 24	4 of 4	11.42	Up
Larval Salivary gland	22 ± 4	4 of 4	1.43	None
Larval midgut	14 ± 2	3 of 4	0.93	None
Larval tubule	12 ± 2	3 of 4	0.80	None
Larval hindgut	7 ± 1	2 of 4	0.49	Down
Larval fat body	27 ± 0	4 of 4	1.80	Up
Larval trachea	11 ± 3	4 of 4	0.71	None
Larval carcass	7 ± 0	0 of 4	0.50	Down
S2 cells (growing)	29 ± 0	4 of 4	1.87	Up
Whole fly	15 ± 2	4 of 4

/// d-spinophilin (CG32295 /// Spn):

Annotation Number : CG32295
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0260480
Gbrowse : chr3L:2525820-2526972 (-) // 99.65 //
Probeset : 1641386_at
Accessions : protein= NP_728755;, nucleotide= NM_167954;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008157 // protein phosphatase 1 binding // inferr
FlyMine data for FBgn0260480.
TRiP has 1 RNAi stocks for FBgn0260480 available for purchase.
VDRC has 3 RNAi stocks for FBgn0260480 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	Down
Head	0 ± 0	0 of 4	0.00	Down
Eye	0 ± 0	0 of 4	0.01	Down
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.00	Down
Salivary gland	2 ± 0	0 of 4	0.05	Down
Crop	1 ± 0	0 of 4	0.00	Down
Midgut	0 ± 0	0 of 4	0.00	Down
Tubule	1 ± 0	0 of 4	0.00	Down
Hindgut	0 ± 0	0 of 4	0.00	Down
Heart	0 ± 0	0 of 4	0.02	Down
Fat body	1 ± 0	0 of 4	0.03	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	685 ± 19	4 of 4	15.10	Up
Male accessory glands	4 ± 3	0 of 4	0.10	Down
Virgin spermatheca	0 ± 0	0 of 4	0.02	Down
Mated spermatheca	0 ± 0	0 of 4	0.01	Down
Adult carcass	1 ± 0	0 of 4	0.00	Down
Larval CNS	0 ± 0	0 of 4	0.01	Down
Larval Salivary gland	2 ± 1	0 of 4	0.05	Down
Larval midgut	1 ± 0	0 of 4	0.02	Down
Larval tubule	1 ± 0	0 of 4	0.00	Down
Larval hindgut	0 ± 0	0 of 4	0.01	Down
Larval fat body	47 ± 30	2 of 4	1.00	None
Larval trachea	2 ± 3	0 of 4	0.06	Down
Larval carcass	1 ± 0	0 of 4	0.03	Down
S2 cells (growing)	0 ± 0	0 of 4	0.01	Down
Whole fly	45 ± 5	4 of 4

d-spinophilin (Spn):

Annotation Number : GM16129
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010905
Gbrowse : chr3L:2541144-2554277 (-) // 100.0 //
Probeset : 1633021_s_at
Accessions : protein= NP_536777;, nucleotide= NM_080516;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008157 // protein phosphatase 1 binding // inferr
FlyMine data for FBgn0010905.
VDRC has 2 RNAi stocks for FBgn0010905 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	543 ± 11	4 of 4	6.70	Up
Head	81 ± 2	4 of 4	1.00	None
Eye	175 ± 17	4 of 4	2.16	Up
Thoracicoabdominal ganglion	459 ± 21	4 of 4	5.70	Up
Salivary gland	19 ± 4	2 of 4	0.24	Down
Crop	83 ± 9	4 of 4	1.00	None
Midgut	112 ± 8	4 of 4	1.40	None
Tubule	822 ± 38	4 of 4	10.20	Up
Hindgut	58 ± 3	4 of 4	0.70	None
Heart	36 ± 3	4 of 4	0.45	Down
Fat body	13 ± 3	3 of 4	0.17	Down
Ovary	305 ± 5	4 of 4	3.80	Up
Testis	22 ± 1	4 of 4	0.30	Down
Male accessory glands	66 ± 6	4 of 4	0.80	None
Virgin spermatheca	49 ± 2	4 of 4	0.61	Down
Mated spermatheca	47 ± 7	4 of 4	0.59	Down
Adult carcass	32 ± 5	3 of 4	0.40	Down
Larval CNS	251 ± 77	4 of 4	3.10	Up
Larval Salivary gland	96 ± 13	4 of 4	1.19	None
Larval midgut	68 ± 6	4 of 4	0.85	None
Larval tubule	170 ± 6	4 of 4	2.10	Up
Larval hindgut	37 ± 2	4 of 4	0.46	Down
Larval fat body	17 ± 2	4 of 4	0.20	Down
Larval trachea	46 ± 8	4 of 4	0.57	Down
Larval carcass	16 ± 2	3 of 4	0.20	Down
S2 cells (growing)	37 ± 1	4 of 4	0.46	Down
Whole fly	81 ± 9	4 of 4

Looking for FBgn0010905. 4 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720