FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0011272 through 18771 annotations produced 1 hits

r-protein L13 (RpL13):

Annotation Number : CG4651
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011272
Gbrowse : chr2L:9967311-9968495 (+) // 100.0 //
Probeset : 1623836_at
Accessions : protein= NP_001033891; /// NP_523530;, nucleotide= NM_001038802; /// NM_078806;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005811 // lipid particle // inferred from direct as
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0011272.
BioGrid reports that CG4651 interacts with CG9271 CG4755 CG8368 .
VDRC has 1 RNAi stocks for FBgn0011272 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2650 ± 80	4 of 4	0.70	None
Head	4111 ± 165	4 of 4	1.20	None
Eye	6011 ± 28	4 of 4	1.70	Up
Thoracicoabdominal ganglion	3607 ± 92	4 of 4	1.00	None
Salivary gland	7504 ± 326	4 of 4	2.12	Up
Crop	5093 ± 331	4 of 4	1.40	Up
Midgut	4624 ± 27	4 of 4	1.30	Up
Tubule	3686 ± 41	4 of 4	1.00	Up
Hindgut	4151 ± 164	4 of 4	1.20	None
Heart	5556 ± 421	4 of 4	1.57	Up
Fat body	4120 ± 728	4 of 4	1.16	None
Ovary	2917 ± 89	4 of 4	0.80	None
Testis	674 ± 14	4 of 4	0.20	Down
Male accessory glands	7924 ± 255	4 of 4	2.20	Up
Virgin spermatheca	3982 ± 144	4 of 4	1.12	None
Mated spermatheca	3907 ± 113	4 of 4	1.10	None
Adult carcass	4681 ± 353	4 of 4	1.30	Up
Larval CNS	2013 ± 128	4 of 4	0.57	Down
Larval Salivary gland	5927 ± 298	4 of 4	1.67	Up
Larval midgut	3456 ± 98	4 of 4	0.97	None
Larval tubule	3980 ± 101	4 of 4	1.10	None
Larval hindgut	3218 ± 24	4 of 4	0.91	None
Larval fat body	6959 ± 746	4 of 4	2.00	Up
Larval trachea	5338 ± 331	4 of 4	1.51	Up
Larval carcass	3644 ± 330	4 of 4	1.03	None
S2 cells (growing)	3255 ± 107	4 of 4	0.92	None
Whole fly	3545 ± 245	4 of 4

Looking for FBgn0011272. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720