FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0011289 through 18771 annotations produced 1 hits

Transcription factor IIA L (TfIIA-L):

Annotation Number : CG5930
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011289
Gbrowse : chr3R:23076833-23082186 (+) // 100.0 //
Probeset : 1624570_a_at
Accessions : protein= NP_476995; /// NP_476996; /// NP_733208;, nucleotide= NM_057647; /// NM_057648; /// NM_170329;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0003702 // RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein
FlyMine data for FBgn0011289.
BioGrid reports that CG5930 interacts with CG6163 CG6172 CG6593 CG7434 CG7808 CG8567 .
VDRC has 2 RNAi stocks for FBgn0011289 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	377 ± 6	4 of 4	0.90	None
Head	371 ± 11	4 of 4	0.80	Down
Eye	455 ± 14	4 of 4	1.04	None
Thoracicoabdominal ganglion	539 ± 26	4 of 4	1.20	Up
Salivary gland	385 ± 16	4 of 4	0.88	None
Crop	455 ± 6	4 of 4	1.00	None
Midgut	385 ± 9	4 of 4	0.90	Down
Tubule	1316 ± 72	4 of 4	3.00	Up
Hindgut	394 ± 6	4 of 4	0.90	None
Heart	505 ± 15	4 of 4	1.16	Up
Fat body	443 ± 26	4 of 4	1.01	None
Ovary	654 ± 7	4 of 4	1.50	Up
Testis	314 ± 7	4 of 4	0.70	Down
Male accessory glands	686 ± 25	4 of 4	1.60	Up
Virgin spermatheca	479 ± 17	4 of 4	1.10	None
Mated spermatheca	481 ± 10	4 of 4	1.10	None
Adult carcass	429 ± 7	4 of 4	1.00	None
Larval CNS	579 ± 16	4 of 4	1.32	Up
Larval Salivary gland	1131 ± 45	4 of 4	2.59	Up
Larval midgut	332 ± 15	4 of 4	0.76	Down
Larval tubule	658 ± 12	4 of 4	1.50	Up
Larval hindgut	454 ± 8	4 of 4	1.04	None
Larval fat body	422 ± 15	4 of 4	1.00	None
Larval trachea	551 ± 36	4 of 4	1.26	Up
Larval carcass	561 ± 29	4 of 4	1.28	Up
S2 cells (growing)	527 ± 9	4 of 4	1.20	Up
Whole fly	437 ± 14	4 of 4

Looking for FBgn0011289. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720