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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0011294 through 18771 annotations produced 1 hits



antennal protein 5 (a5):

Annotation Number : CG5430
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011294
Gbrowse : chr2L:1329160-1329904 (+) // 100.0 //
Probeset : 1628647_at
Accessions : protein= NP_476998;, nucleotide= NM_057650;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008429 // phosphatidylethanolamine binding // infe
FlyMine data for FBgn0011294.
VDRC has 3 RNAi stocks for FBgn0011294 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head804 ± 804 of 417.40Up
Eye104 ± 503 of 4 2.25None
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland8 ± 30 of 4 0.19Down
Crop3 ± 10 of 4 0.10Down
Midgut2 ± 00 of 4 0.10Down
Tubule1 ± 00 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart0 ± 00 of 4 0.01Down
Fat body0 ± 00 of 4 0.02Down
Ovary1 ± 00 of 4 0.00Down
Testis4 ± 10 of 4 0.10Down
Male accessory glands3 ± 10 of 4 0.10Down
Virgin spermatheca0 ± 00 of 4 0.02Down
Mated spermatheca1 ± 00 of 4 0.03Down
Adult carcass4 ± 10 of 4 0.10Down
Larval CNS2 ± 20 of 4 0.06Down
Larval Salivary gland1 ± 00 of 4 0.03Down
Larval midgut10 ± 20 of 4 0.22Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.03Down
Larval fat body2 ± 10 of 4 0.10Down
Larval trachea1 ± 10 of 4 0.02Down
Larval carcass2 ± 00 of 4 0.06Down
S2 cells (growing)0 ± 00 of 4 0.02Down
Whole fly46 ± 24 of 4

Looking for FBgn0011294. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime