Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0011305 through 18771 annotations produced 1 hits



Repressor splicing factor 1 (Rsf1):

Annotation Number : CG5655
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011305
Gbrowse : chr2L:10262425-10263582 (-) // 100.0 //
Probeset : 1641116_at
Accessions : protein= NP_477001;, nucleotide= NM_057653;
Pathway : via spliceosome // traceable author statement"
Interpro : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 //
FlyMine data for FBgn0011305.
BDGP gene expression has embryonic in situ data for Rsf1: 11 pix of staining in 11 body parts.
BioGrid reports that CG5655 interacts with CG8144 CG10851 .
VDRC has 1 RNAi stocks for FBgn0011305 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain940 394 of 4 4.50Up
Head365 154 of 4 1.70Up
Eye754 404 of 4 3.59Up
Thoracicoabdominal ganglion985 474 of 4 4.70Up
Salivary gland290 254 of 4 1.38Up
Crop310 284 of 4 1.50Up
Midgut175 44 of 4 0.80Down
Tubule153 64 of 4 0.70Down
Hindgut263 94 of 4 1.30Up
Heart257 64 of 4 1.22Up
Fat body178 194 of 4 0.85None
Ovary320 64 of 4 1.50Up
Testis150 64 of 4 0.70Down
Male accessory glands419 184 of 4 2.00Up
Virgin spermatheca317 314 of 4 1.51Up
Mated spermatheca352 164 of 4 1.68Up
Adult carcass190 94 of 4 0.90None
Larval CNS1368 724 of 4 6.52Up
Larval Salivary gland159 84 of 4 0.76Down
Larval midgut147 54 of 4 0.70Down
Larval tubule201 114 of 4 1.00None
Larval hindgut316 154 of 4 1.51Up
Larval fat body362 244 of 4 1.70Up
Larval trachea558 144 of 4 2.66Up
Larval carcass319 164 of 4 1.52Up
S2 cells (growing)393 64 of 4 1.88Up
Whole fly210 94 of 4

Looking for FBgn0011305. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime