FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0011361 through 18771 annotations produced 3 hits

NADH-ubiquinone oxidoreductase acyl-carrier subunit (mtacp1):

Annotation Number : CG9160
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011361
Gbrowse : chr3L:1329805-1331633 (+) // 100.0 //
Probeset : 1624776_a_at
Accessions : protein= NP_477002; /// NP_477003;, nucleotide= NM_057654; /// NM_057655;
Pathway : NADH to ubiquinone // not recorded /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotatio
Interpro : 0005739 // mitochondrion // not recorded /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070469
FlyMine data for FBgn0011361.
BDGP gene expression has embryonic in situ data for mtacp1: 10 pix of staining in 3 body parts.
TRiP has 2 RNAi stocks for FBgn0011361 available for purchase.
VDRC has 5 RNAi stocks for FBgn0011361 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	862 ± 11	4 of 4	0.90	None
Head	929 ± 41	4 of 4	1.00	None
Eye	1072 ± 46	4 of 4	1.16	Up
Thoracicoabdominal ganglion	1099 ± 38	4 of 4	1.20	Up
Salivary gland	1514 ± 7	4 of 4	1.64	Up
Crop	818 ± 43	4 of 4	0.90	None
Midgut	1012 ± 17	4 of 4	1.10	Up
Tubule	1194 ± 30	4 of 4	1.30	Up
Hindgut	1488 ± 37	4 of 4	1.60	Up
Heart	1217 ± 39	4 of 4	1.32	Up
Fat body	1529 ± 121	4 of 4	1.65	Up
Ovary	736 ± 7	4 of 4	0.80	Down
Testis	382 ± 1	4 of 4	0.40	Down
Male accessory glands	506 ± 10	4 of 4	0.50	Down
Virgin spermatheca	1516 ± 46	4 of 4	1.64	Up
Mated spermatheca	1253 ± 31	4 of 4	1.35	Up
Adult carcass	1639 ± 57	4 of 4	1.80	Up
Larval CNS	767 ± 44	4 of 4	0.83	Down
Larval Salivary gland	655 ± 17	4 of 4	0.71	Down
Larval midgut	778 ± 27	4 of 4	0.84	Down
Larval tubule	641 ± 53	4 of 4	0.70	Down
Larval hindgut	1316 ± 41	4 of 4	1.42	Up
Larval fat body	422 ± 19	4 of 4	0.50	Down
Larval trachea	582 ± 38	4 of 4	0.63	Down
Larval carcass	1079 ± 104	4 of 4	1.17	None
S2 cells (growing)	778 ± 8	4 of 4	0.84	Down
Whole fly	925 ± 29	4 of 4

NADH-ubiquinone oxidoreductase acyl-carrier subunit (mtacp1):

Annotation Number : CG9160
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011361
Gbrowse : chr3L:1329805-1331633 (+) // 100.0 //
Probeset : 1634955_at
Accessions : protein= NP_477002; /// NP_477003;, nucleotide= NM_057654; /// NM_057655;
Pathway : NADH to ubiquinone // not recorded /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotatio
Interpro : 0005739 // mitochondrion // not recorded /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070469
FlyMine data for FBgn0011361.
BDGP gene expression has embryonic in situ data for mtacp1: 10 pix of staining in 3 body parts.
TRiP has 2 RNAi stocks for FBgn0011361 available for purchase.
VDRC has 5 RNAi stocks for FBgn0011361 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	490 ± 8	4 of 4	0.80	None
Head	669 ± 43	4 of 4	1.10	None
Eye	778 ± 22	4 of 4	1.32	Up
Thoracicoabdominal ganglion	555 ± 23	4 of 4	0.90	None
Salivary gland	1333 ± 25	4 of 4	2.26	Up
Crop	563 ± 30	4 of 4	1.00	None
Midgut	785 ± 15	4 of 4	1.30	Up
Tubule	496 ± 30	4 of 4	0.80	Down
Hindgut	1278 ± 22	4 of 4	2.20	Up
Heart	1203 ± 34	4 of 4	2.04	Up
Fat body	1215 ± 132	4 of 4	2.06	Up
Ovary	387 ± 2	4 of 4	0.70	Down
Testis	147 ± 9	4 of 4	0.20	Down
Male accessory glands	433 ± 10	4 of 4	0.70	Down
Virgin spermatheca	722 ± 51	4 of 4	1.22	None
Mated spermatheca	677 ± 35	4 of 4	1.15	None
Adult carcass	1211 ± 30	4 of 4	2.00	Up
Larval CNS	487 ± 74	4 of 4	0.82	None
Larval Salivary gland	509 ± 8	4 of 4	0.86	None
Larval midgut	512 ± 25	4 of 4	0.87	None
Larval tubule	454 ± 49	4 of 4	0.80	None
Larval hindgut	935 ± 48	4 of 4	1.58	Up
Larval fat body	302 ± 31	4 of 4	0.50	Down
Larval trachea	539 ± 35	4 of 4	0.91	None
Larval carcass	942 ± 58	4 of 4	1.59	Up
S2 cells (growing)	617 ± 18	4 of 4	1.04	None
Whole fly	591 ± 41	4 of 4

NADH-ubiquinone oxidoreductase acyl-carrier subunit (mtacp1):

Annotation Number : CG9160
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011361
Gbrowse : chr3L:1329805-1331633 (+) // 100.0 //
Probeset : 1624715_at
Accessions : protein= NP_477002; /// NP_477003;, nucleotide= NM_057654; /// NM_057655;
Pathway : NADH to ubiquinone // not recorded /// 0006633 // fatty acid biosynthetic process // inferred from electronic annotatio
Interpro : 0005739 // mitochondrion // not recorded /// 0005739 // mitochondrion // inferred from electronic annotation /// 0070469
FlyMine data for FBgn0011361.
BDGP gene expression has embryonic in situ data for mtacp1: 10 pix of staining in 3 body parts.
TRiP has 2 RNAi stocks for FBgn0011361 available for purchase.
VDRC has 5 RNAi stocks for FBgn0011361 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	720 ± 11	4 of 4	0.90	None
Head	820 ± 54	4 of 4	1.00	None
Eye	1084 ± 33	4 of 4	1.34	Up
Thoracicoabdominal ganglion	907 ± 38	4 of 4	1.10	None
Salivary gland	1095 ± 55	4 of 4	1.35	Up
Crop	532 ± 27	4 of 4	0.70	Down
Midgut	825 ± 27	4 of 4	1.00	None
Tubule	1063 ± 18	4 of 4	1.30	Up
Hindgut	782 ± 49	4 of 4	1.00	None
Heart	976 ± 42	4 of 4	1.21	Up
Fat body	1128 ± 40	4 of 4	1.39	Up
Ovary	675 ± 8	4 of 4	0.80	None
Testis	451 ± 10	4 of 4	0.60	Down
Male accessory glands	248 ± 7	4 of 4	0.30	Down
Virgin spermatheca	728 ± 56	4 of 4	0.90	None
Mated spermatheca	623 ± 19	4 of 4	0.77	Down
Adult carcass	1269 ± 78	4 of 4	1.60	Up
Larval CNS	590 ± 66	4 of 4	0.73	Down
Larval Salivary gland	836 ± 39	4 of 4	1.03	None
Larval midgut	614 ± 30	4 of 4	0.76	Down
Larval tubule	503 ± 38	4 of 4	0.60	Down
Larval hindgut	732 ± 25	4 of 4	0.90	None
Larval fat body	276 ± 9	4 of 4	0.30	Down
Larval trachea	543 ± 40	4 of 4	0.67	Down
Larval carcass	817 ± 77	4 of 4	1.01	None
S2 cells (growing)	714 ± 17	4 of 4	0.88	None
Whole fly	809 ± 49	4 of 4

Looking for FBgn0011361. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720