FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0011604 through 18771 annotations produced 1 hits

ISWI ATPase (Iswi):

Annotation Number : CG8625
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011604
Gbrowse : chr2R:8524122-8528133 (+) // 100.0 //
Probeset : 1641309_s_at
Accessions : protein= NP_523719; /// NP_725203; /// NP_725204;, nucleotide= NM_078995; /// NM_165930; /// NM_165931;
Pathway : DNA-dependent // inferred from direct assay /// 0007517 // muscle organ development // inferred from mutant phenotype /
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from p
FlyMine data for FBgn0011604.
BDGP gene expression has embryonic in situ data for Iswi: 19 pix of staining in 14 body parts.
Homophila reports that CG8625 is a close match (3e-24) to human gene HARP;SIOD;SMARCAL1 (NP_054859), a gene associated with Schimke immunoosseous dysplasia, 242900 (3).
BioGrid reports that CG8625 interacts with CG4236 CG1966 Dmel CG13399 CG15736 Dmel CG13399 CG1966 Dmel CG13399 CG15736 CG1966 CG1966 CG32346 .
TRiP has 2 RNAi stocks for FBgn0011604 available for purchase.
VDRC has 2 RNAi stocks for FBgn0011604 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	272 ± 2	4 of 4	1.40	Up
Head	88 ± 7	4 of 4	0.50	Down
Eye	120 ± 10	4 of 4	0.64	Down
Thoracicoabdominal ganglion	234 ± 8	4 of 4	1.20	Up
Salivary gland	122 ± 9	4 of 4	0.65	Down
Crop	90 ± 6	4 of 4	0.50	Down
Midgut	86 ± 4	4 of 4	0.50	Down
Tubule	98 ± 4	4 of 4	0.50	Down
Hindgut	95 ± 4	4 of 4	0.50	Down
Heart	58 ± 4	4 of 4	0.31	Down
Fat body	51 ± 6	4 of 4	0.27	Down
Ovary	427 ± 16	4 of 4	2.30	Up
Testis	340 ± 7	4 of 4	1.80	Up
Male accessory glands	63 ± 4	4 of 4	0.30	Down
Virgin spermatheca	37 ± 2	4 of 4	0.20	Down
Mated spermatheca	36 ± 0	4 of 4	0.19	Down
Adult carcass	43 ± 5	4 of 4	0.20	Down
Larval CNS	787 ± 60	4 of 4	4.17	Up
Larval Salivary gland	178 ± 15	4 of 4	0.94	None
Larval midgut	80 ± 6	4 of 4	0.42	Down
Larval tubule	147 ± 5	4 of 4	0.80	Down
Larval hindgut	116 ± 5	4 of 4	0.61	Down
Larval fat body	110 ± 24	4 of 4	0.60	Down
Larval trachea	208 ± 17	4 of 4	1.10	None
Larval carcass	129 ± 4	4 of 4	0.69	Down
S2 cells (growing)	587 ± 35	4 of 4	3.11	Up
Whole fly	188 ± 12	4 of 4

Looking for FBgn0011604. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720