FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0011715 through 18771 annotations produced 1 hits

snf5-related 1 (Snr1):

Annotation Number : CG1064
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011715
Gbrowse : chr3R:1296638-1298481 (+) // 100.0 //
Probeset : 1625112_at
Accessions : protein= NP_730935;, nucleotide= NM_169055;
Pathway : DNA-dependent // inferred from direct assay /// 0048813 // dendrite morphogenesis // inferred from mutant phenotype"
Interpro : 0000228 // nuclear chromosome // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or
FlyMine data for FBgn0011715.
BDGP gene expression has embryonic in situ data for Snr1: 27 pix of staining in 21 body parts.
Homophila reports that CG1064 is a close match (3e-134) to human gene SMARCB1;SNF5;INI1;RDT (NP_003064), a gene associated with Rhabdoid predisposition syndrome, familial (3);Rhabdoid tumors (3).
BioGrid reports that CG1064 interacts with CG13165 CG18259 CG11314 CG11607 CG12175 CG12432 CG12835 CG12985 CG13423 CG13728 CG1391 CG1461 CG14939 CG15151 CG15482 CG15646 CG1641 CG16724 CG2052 CG2168 CG3027 CG31163 CG32514 CG3825 CG3929 CG4303 CG4609 CG7352 CG7404 CG8301 CG9097 CG9665 CG9745 CG1028 CG5942 CG5942 CG6502 CG6502 CG7467 CG8651 CG3938 .
TRiP has 1 RNAi stocks for FBgn0011715 available for purchase.
VDRC has 3 RNAi stocks for FBgn0011715 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	251 ± 4	4 of 4	0.80	Down
Head	170 ± 3	4 of 4	0.60	Down
Eye	267 ± 12	4 of 4	0.90	None
Thoracicoabdominal ganglion	242 ± 5	4 of 4	0.80	Down
Salivary gland	173 ± 9	3 of 4	0.58	Down
Crop	201 ± 7	4 of 4	0.70	Down
Midgut	158 ± 6	4 of 4	0.50	Down
Tubule	149 ± 1	4 of 4	0.50	Down
Hindgut	152 ± 3	4 of 4	0.50	Down
Heart	152 ± 6	4 of 4	0.51	Down
Fat body	84 ± 3	4 of 4	0.28	Down
Ovary	602 ± 9	4 of 4	2.00	Up
Testis	86 ± 3	4 of 4	0.30	Down
Male accessory glands	263 ± 12	4 of 4	0.90	None
Virgin spermatheca	137 ± 6	4 of 4	0.46	Down
Mated spermatheca	168 ± 10	4 of 4	0.56	Down
Adult carcass	120 ± 3	4 of 4	0.40	Down
Larval CNS	618 ± 20	4 of 4	2.08	Up
Larval Salivary gland	223 ± 8	4 of 4	0.75	Down
Larval midgut	151 ± 9	4 of 4	0.51	Down
Larval tubule	192 ± 3	4 of 4	0.60	Down
Larval hindgut	158 ± 4	4 of 4	0.53	Down
Larval fat body	137 ± 11	4 of 4	0.50	Down
Larval trachea	347 ± 11	4 of 4	1.17	Up
Larval carcass	202 ± 8	4 of 4	0.68	Down
S2 cells (growing)	314 ± 11	4 of 4	1.06	None
Whole fly	298 ± 3	4 of 4

Looking for FBgn0011715. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720