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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0011722 through 18771 annotations produced 1 hits



tiggrin (Tig):

Annotation Number : CG11527
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011722
Gbrowse : chr2L:6415256-6423308 (-) // 100.0 //
Probeset : 1634546_at
Accessions : protein= NP_477033;, nucleotide= NM_057685;
Pathway : engulfment // inferred from mutant phenotype /// 0007411 // axon guidance // inferred from mutant phenotype /// 0033628
Interpro : 0005578 // proteinaceous extracellular matrix // inferred from direct assay /// 0005578 // proteinaceous extracellular m
FlyMine data for FBgn0011722.
BDGP gene expression has embryonic in situ data for Tig: 10 pix of staining in 2 body parts.
BioGrid reports that CG11527 interacts with CG3499 CG4335 .
TRiP has 1 RNAi stocks for FBgn0011722 available for purchase.
VDRC has 3 RNAi stocks for FBgn0011722 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain27 ± 63 of 4 0.50Down
Head164 ± 154 of 4 2.80Up
Eye108 ± 154 of 4 1.82Up
Thoracicoabdominal ganglion27 ± 22 of 4 0.50Down
Salivary gland17 ± 30 of 4 0.30Down
Crop64 ± 34 of 4 1.10None
Midgut10 ± 30 of 4 0.20Down
Tubule12 ± 10 of 4 0.20Down
Hindgut69 ± 124 of 4 1.20None
Heart208 ± 104 of 4 3.49Up
Fat body438 ± 614 of 4 7.33Up
Ovary3 ± 10 of 4 0.10Down
Testis19 ± 04 of 4 0.30Down
Male accessory glands10 ± 10 of 4 0.20Down
Virgin spermatheca388 ± 274 of 4 6.49Up
Mated spermatheca691 ± 844 of 411.57Up
Adult carcass261 ± 204 of 4 4.40Up
Larval CNS19 ± 24 of 4 0.33Down
Larval Salivary gland79 ± 24 of 4 1.33Up
Larval midgut12 ± 10 of 4 0.21Down
Larval tubule17 ± 30 of 4 0.30Down
Larval hindgut156 ± 134 of 4 2.61Up
Larval fat body2172 ± 1534 of 436.30Up
Larval trachea130 ± 584 of 4 2.18None
Larval carcass107 ± 64 of 4 1.80Up
S2 cells (growing)1139 ± 194 of 419.06Up
Whole fly59 ± 54 of 4

Looking for FBgn0011722. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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