Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0011740 through 18771 annotations produced 1 hits



alpha-mannosidase 2 (alpha-Man-II):

Annotation Number : CG18802
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011740
Gbrowse : chr3R:5238270-5242986 (+) // 100.0 //
Probeset : 1626112_at
Accessions : protein= NP_524291;, nucleotide= NM_079567;
Pathway : 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0000139 // Golgi membrane // non-tracea
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004553 // hydrolase activity
FlyMine data for FBgn0011740.
BDGP gene expression has embryonic in situ data for alpha-Man-II: 9 pix of staining in 1 body parts.
Homophila reports that CG18802 is a close match (3e-65) to human gene MAN2B1;MANB (NP_000519), a gene associated with Mannosidosis, alpha-, types I and II, 248500 (3).
BioGrid reports that CG18802 interacts with CG5501 CG32772 .
VDRC has 1 RNAi stocks for FBgn0011740 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain199 ± 44 of 4 1.90Up
Head117 ± 24 of 4 1.10None
Eye146 ± 84 of 4 1.38Up
Thoracicoabdominal ganglion195 ± 54 of 4 1.80Up
Salivary gland79 ± 14 of 4 0.75Down
Crop79 ± 24 of 4 0.80Down
Midgut23 ± 14 of 4 0.20Down
Tubule204 ± 164 of 4 1.90Up
Hindgut48 ± 24 of 4 0.50Down
Heart79 ± 44 of 4 0.75Down
Fat body78 ± 54 of 4 0.74Down
Ovary209 ± 24 of 4 2.00Up
Testis100 ± 24 of 4 1.00None
Male accessory glands628 ± 334 of 4 5.90Up
Virgin spermatheca70 ± 44 of 4 0.67Down
Mated spermatheca80 ± 24 of 4 0.76Down
Adult carcass67 ± 24 of 4 0.60Down
Larval CNS266 ± 74 of 4 2.51Up
Larval Salivary gland107 ± 34 of 4 1.01None
Larval midgut18 ± 03 of 4 0.17Down
Larval tubule90 ± 34 of 4 0.90None
Larval hindgut77 ± 24 of 4 0.74Down
Larval fat body60 ± 34 of 4 0.60Down
Larval trachea148 ± 114 of 4 1.40Up
Larval carcass134 ± 64 of 4 1.27Up
S2 cells (growing)150 ± 44 of 4 1.42Up
Whole fly105 ± 54 of 4

Looking for FBgn0011740. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime