FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0011758 through 18771 annotations produced 1 hits

Bar-H1 (B-H1):

Annotation Number : CG5529
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011758
Gbrowse : chrX:17291533-17297312 (+) // 100.0 //
Probeset : 1636203_at
Accessions : protein= NP_523387;, nucleotide= NM_078663;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006355 // regulation of transcription
Interpro : DNA-dependent // non-traceable author statement /// 0007275 // multicellular organismal development // inferred from el
FlyMine data for FBgn0011758.
BDGP gene expression has embryonic in situ data for B-H1: 56 pix of staining in 23 body parts.
Homophila reports that CG5529 is a close match (9e-11) to human gene CDHS;HUP2;PAX3;WS1 (NP_852123), a gene associated with Craniofacial-deafness-hand syndrome, 122880 (3);Rhabdomyosarcoma, alveolar, 268220 (3);Waardenburg syndrome, type I, 193500 (3);Waardenburg syndrome, type III, 148820 (3).
BioGrid reports that CG5529 interacts with CG6459 CG8120 CG3166 CG2845 CG17077 CG9375 CG9375 CG18085 CG10079 CG6033 CG3936 .
TRiP has 1 RNAi stocks for FBgn0011758 available for purchase.
VDRC has 1 RNAi stocks for FBgn0011758 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	7 ± 0	2 of 4	2.20	Up
Head	13 ± 3	4 of 4	4.20	None
Eye	31 ± 3	4 of 4	9.91	Up
Thoracicoabdominal ganglion	6 ± 1	2 of 4	2.10	None
Salivary gland	5 ± 3	0 of 4	1.82	None
Crop	0 ± 0	0 of 4	0.20	Down
Midgut	2 ± 1	0 of 4	0.90	None
Tubule	1 ± 0	0 of 4	0.60	Down
Hindgut	1 ± 1	0 of 4	0.60	None
Heart	3 ± 1	0 of 4	1.10	None
Fat body	4 ± 2	0 of 4	1.42	None
Ovary	2 ± 0	0 of 4	0.70	None
Testis	1 ± 0	1 of 4	0.40	None
Male accessory glands	7 ± 3	2 of 4	2.40	None
Virgin spermatheca	2 ± 0	0 of 4	0.78	None
Mated spermatheca	2 ± 1	0 of 4	0.78	None
Adult carcass	9 ± 3	1 of 4	3.00	None
Larval CNS	37 ± 5	4 of 4	11.48	Up
Larval Salivary gland	2 ± 0	0 of 4	0.80	None
Larval midgut	3 ± 1	0 of 4	1.09	None
Larval tubule	1 ± 0	0 of 4	0.50	None
Larval hindgut	1 ± 0	0 of 4	0.46	None
Larval fat body	2 ± 1	0 of 4	0.70	None
Larval trachea	4 ± 1	0 of 4	1.53	None
Larval carcass	5 ± 0	1 of 4	1.69	Up
S2 cells (growing)	1 ± 0	0 of 4	0.42	None
Whole fly	3 ± 0	1 of 4

Looking for FBgn0011758. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720