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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0011812 through 18771 annotations produced 1 hits


Annotation Number : CR30367
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011812
Gbrowse : chr2R:4320390-4320889 (-) // 100.0 //
Probeset : 1624647_at
Accessions : protein= , nucleotide=
FlyMine data for FBgn0011812.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 00 of 4 7.00Up
Head1 10 of 4 3.80None
Eye0 00 of 4 1.80None
Thoracicoabdominal ganglion1 00 of 4 2.40None
Salivary gland4 10 of 4 8.30None
Crop4 00 of 4 8.60Up
Midgut4 10 of 4 9.20None
Tubule2 00 of 4 5.30Up
Hindgut2 10 of 4 5.70None
Heart0 00 of 4 1.05None
Fat body2 20 of 4 4.75None
Ovary1 10 of 4 3.20None
Testis1 00 of 4 2.80None
Male accessory glands0 00 of 4 1.50None
Virgin spermatheca3 10 of 4 7.85None
Mated spermatheca5 10 of 411.40None
Adult carcass5 30 of 410.10None
Larval CNS1 00 of 4 2.40None
Larval Salivary gland2 00 of 4 5.45Up
Larval midgut0 00 of 4 1.50None
Larval tubule2 10 of 4 4.40None
Larval hindgut7 20 of 415.80None
Larval fat body6 10 of 412.00Up
Larval trachea6 00 of 413.65Up
Larval carcass10 00 of 421.35Up
S2 cells (growing)1 00 of 4 2.85None
Whole fly0 00 of 4

Looking for FBgn0011812. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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