FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0011817 through 18771 annotations produced 2 hits

nemo (nmo):

Annotation Number : CG7892
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011817
Gbrowse : chr3L:7972148-8043450 (+) // 100.0 //
Probeset : 1624300_s_at
Accessions : protein= NP_523967; /// NP_729316; /// NP_729317; /// NP_729318; /// NP_729319; /// NP_729320;, nucleotide= NM_079243; /// NM_168248; /// NM_168249; /// NM_168250; /// NM_168251; /// NM_168252;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0011817.
BDGP gene expression has embryonic in situ data for nmo: 18 pix of staining in 7 body parts.
Homophila reports that CG7892 is a close match (7e-11) to human gene NTRK2;TRKB (NP_006171), a gene associated with Obesity, hyperphagia, and developmental delay (3).
BioGrid reports that CG7892 interacts with CG9511 CG5680 CG3619 CG3619 CG9885 CG5460 CG5460 CG2275 CG14548 CG11450 CG4444 CG17579 CG17579 CG5123 CG3936 CG3936 CG2248 CG16973 CG4319 CG18492 CG18492 CG18492 CG18492 CG17964 .
TRiP has 4 RNAi stocks for FBgn0011817 available for purchase.
VDRC has 3 RNAi stocks for FBgn0011817 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	560 ± 26	4 of 4	2.90	Up
Head	145 ± 3	4 of 4	0.80	Down
Eye	86 ± 3	4 of 4	0.45	Down
Thoracicoabdominal ganglion	523 ± 28	4 of 4	2.70	Up
Salivary gland	136 ± 12	4 of 4	0.71	Down
Crop	102 ± 4	4 of 4	0.50	Down
Midgut	38 ± 5	0 of 4	0.20	Down
Tubule	45 ± 2	4 of 4	0.20	Down
Hindgut	67 ± 2	4 of 4	0.40	Down
Heart	49 ± 2	4 of 4	0.25	Down
Fat body	86 ± 19	4 of 4	0.45	Down
Ovary	365 ± 10	4 of 4	1.90	Up
Testis	683 ± 25	4 of 4	3.50	Up
Male accessory glands	56 ± 2	4 of 4	0.30	Down
Virgin spermatheca	86 ± 6	4 of 4	0.45	Down
Mated spermatheca	76 ± 7	4 of 4	0.40	Down
Adult carcass	60 ± 1	4 of 4	0.30	Down
Larval CNS	710 ± 27	4 of 4	3.68	Up
Larval Salivary gland	89 ± 7	4 of 4	0.46	Down
Larval midgut	48 ± 4	4 of 4	0.25	Down
Larval tubule	50 ± 3	4 of 4	0.30	Down
Larval hindgut	92 ± 9	4 of 4	0.48	Down
Larval fat body	205 ± 47	4 of 4	1.10	None
Larval trachea	75 ± 9	4 of 4	0.39	Down
Larval carcass	116 ± 15	4 of 4	0.60	Down
S2 cells (growing)	109 ± 2	4 of 4	0.57	Down
Whole fly	192 ± 13	4 of 4

/// nemo (CG3841 /// nmo):

Annotation Number : CG3841
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032131
Gbrowse : chr2L:9589665-9591547 (+) // 100.0 //
Probeset : 1632400_at
Accessions : protein= NP_609300;, nucleotide= NM_135456;
Interpro : 0004091 // carboxylesterase activity // inferred from sequence or structural similarity /// 0004091 // carboxylesterase
FlyMine data for FBgn0032131.
Homophila reports that CG3841 is a close match (4e-27) to human gene AITD3;TG (NP_003226), a gene associated with Goiter, adolescent multinodular (1);Goiter, nonendemic, simple (3);Hypothyroidism, hereditary congenital (3);{Autoimmune thyroid disease, susceptibility to 3}, 608175 (3).
VDRC has 3 RNAi stocks for FBgn0032131 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.00	Down
Head	5 ± 1	0 of 4	0.10	Down
Eye	1 ± 0	0 of 4	0.02	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.00	Down
Salivary gland	4 ± 1	0 of 4	0.06	Down
Crop	3 ± 1	0 of 4	0.00	Down
Midgut	1030 ± 18	4 of 4	15.40	Up
Tubule	5 ± 0	0 of 4	0.10	Down
Hindgut	5 ± 1	0 of 4	0.10	Down
Heart	3 ± 0	0 of 4	0.05	Down
Fat body	5 ± 2	0 of 4	0.09	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	102 ± 5	4 of 4	1.50	Up
Male accessory glands	6 ± 2	0 of 4	0.10	Down
Virgin spermatheca	3 ± 1	0 of 4	0.05	Down
Mated spermatheca	3 ± 1	0 of 4	0.05	Down
Adult carcass	6 ± 2	0 of 4	0.10	Down
Larval CNS	3 ± 1	0 of 4	0.05	Down
Larval Salivary gland	6 ± 2	0 of 4	0.09	Down
Larval midgut	280 ± 19	4 of 4	4.18	Up
Larval tubule	2 ± 1	0 of 4	0.00	Down
Larval hindgut	2 ± 1	0 of 4	0.04	Down
Larval fat body	20 ± 9	2 of 4	0.30	Down
Larval trachea	3 ± 3	0 of 4	0.06	Down
Larval carcass	6 ± 1	2 of 4	0.10	Down
S2 cells (growing)	2 ± 0	0 of 4	0.03	Down
Whole fly	67 ± 6	4 of 4

Looking for FBgn0011817. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720