FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0013347 through 18771 annotations produced 1 hits

Transcription-factor-IIA-S (TfIIA-S):

Annotation Number : CG5163
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013347
Gbrowse : chr3R:19716108-19716778 (-) // 100.0 //
Probeset : 1632370_at
Accessions : protein= NP_524467;, nucleotide= NM_079743;
Pathway : 0005634 // nucleus // non-traceable author statement /// 0005634 // nucleus // inferred from electronic annotation /// 0
Interpro : 0003702 // RNA polymerase II transcription factor activity // inferred from electronic annotation /// 0005515 // protein
FlyMine data for FBgn0013347.
BDGP gene expression has embryonic in situ data for TfIIA-S: 16 pix of staining in 11 body parts.
BioGrid reports that CG5163 interacts with CG5930 CG9375 CG9375 CG12559 CG18085 CG18085 CG11502 .
TRiP has 1 RNAi stocks for FBgn0013347 available for purchase.
VDRC has 3 RNAi stocks for FBgn0013347 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	449 ± 15	4 of 4	1.20	Up
Head	342 ± 23	4 of 4	0.90	None
Eye	772 ± 17	4 of 4	2.01	Up
Thoracicoabdominal ganglion	447 ± 19	4 of 4	1.20	Up
Salivary gland	411 ± 28	4 of 4	1.07	None
Crop	399 ± 13	4 of 4	1.00	None
Midgut	381 ± 14	4 of 4	1.00	None
Tubule	181 ± 5	4 of 4	0.50	Down
Hindgut	418 ± 15	4 of 4	1.10	None
Heart	486 ± 22	4 of 4	1.27	Up
Fat body	180 ± 9	4 of 4	0.47	Down
Ovary	518 ± 10	4 of 4	1.30	Up
Testis	269 ± 10	4 of 4	0.70	Down
Male accessory glands	698 ± 12	4 of 4	1.80	Up
Virgin spermatheca	135 ± 3	4 of 4	0.35	Down
Mated spermatheca	122 ± 15	4 of 4	0.32	Down
Adult carcass	257 ± 7	4 of 4	0.70	Down
Larval CNS	768 ± 58	4 of 4	2.00	Up
Larval Salivary gland	561 ± 17	4 of 4	1.46	Up
Larval midgut	262 ± 9	4 of 4	0.68	Down
Larval tubule	494 ± 9	4 of 4	1.30	Up
Larval hindgut	308 ± 12	4 of 4	0.80	Down
Larval fat body	445 ± 53	4 of 4	1.20	None
Larval trachea	629 ± 54	4 of 4	1.64	Up
Larval carcass	273 ± 22	4 of 4	0.71	Down
S2 cells (growing)	780 ± 6	4 of 4	2.03	Up
Whole fly	384 ± 15	4 of 4

Looking for FBgn0013347. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720