FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0013746 through 18771 annotations produced 1 hits

d-Alien (alien):

Annotation Number : CG9556
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013746
Gbrowse : chr2L:8995539-8997375 (-) // 100.0 //
Probeset : 1638830_at
Accessions : protein= NP_523517; /// NP_723438;, nucleotide= NM_078793; /// NM_164843;
Pathway : engulfment // inferred from mutant phenotype /// 0007165 // signal transduction // inferred from sequence or structural
Interpro : DNA-dependent // inferred from direct assay /// 0045892 // negative regulation of transcription
FlyMine data for FBgn0013746.
BDGP gene expression has embryonic in situ data for alien: 15 pix of staining in 12 body parts.
BioGrid reports that CG9556 interacts with CG9556 CG1765 CG11502 CG4059 .
TRiP has 1 RNAi stocks for FBgn0013746 available for purchase.
VDRC has 1 RNAi stocks for FBgn0013746 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	436 ± 16	4 of 4	1.10	Up
Head	375 ± 21	4 of 4	1.00	None
Eye	525 ± 12	4 of 4	1.34	Up
Thoracicoabdominal ganglion	379 ± 16	4 of 4	1.00	None
Salivary gland	282 ± 19	4 of 4	0.72	Down
Crop	358 ± 14	4 of 4	0.90	None
Midgut	345 ± 12	4 of 4	0.90	Down
Tubule	346 ± 11	4 of 4	0.90	Down
Hindgut	323 ± 5	4 of 4	0.80	Down
Heart	265 ± 6	4 of 4	0.68	Down
Fat body	252 ± 10	4 of 4	0.65	Down
Ovary	609 ± 9	4 of 4	1.60	Up
Testis	263 ± 4	4 of 4	0.70	Down
Male accessory glands	362 ± 9	4 of 4	0.90	None
Virgin spermatheca	461 ± 7	4 of 4	1.18	Up
Mated spermatheca	432 ± 11	4 of 4	1.11	Up
Adult carcass	228 ± 14	4 of 4	0.60	Down
Larval CNS	639 ± 17	4 of 4	1.63	Up
Larval Salivary gland	407 ± 6	4 of 4	1.04	None
Larval midgut	392 ± 5	4 of 4	1.00	None
Larval tubule	718 ± 14	4 of 4	1.80	Up
Larval hindgut	402 ± 8	4 of 4	1.03	None
Larval fat body	476 ± 25	4 of 4	1.20	Up
Larval trachea	497 ± 45	4 of 4	1.27	Up
Larval carcass	450 ± 16	4 of 4	1.15	Up
S2 cells (growing)	429 ± 5	4 of 4	1.10	Up
Whole fly	391 ± 7	4 of 4

Looking for FBgn0013746. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720