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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0013767 through 18771 annotations produced 1 hits



corazonin (Crz):

Annotation Number : CG3302
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013767
Gbrowse : chr3R:10140657-10141439 (+) // 100.0 //
Probeset : 1641343_at
Accessions : protein= NP_524350;, nucleotide= NM_079626;
Pathway : 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from elect
Interpro : 0005184 // neuropeptide hormone activity // non-traceable author statement /// 0005184 // neuropeptide hormone activity
FlyMine data for FBgn0013767.
TRiP has 1 RNAi stocks for FBgn0013767 available for purchase.
VDRC has 3 RNAi stocks for FBgn0013767 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1102 ± 394 of 469.70Up
Head265 ± 184 of 416.80Up
Eye12 ± 22 of 4 0.76None
Thoracicoabdominal ganglion20 ± 23 of 4 1.30None
Salivary gland6 ± 30 of 4 0.41None
Crop3 ± 10 of 4 0.20Down
Midgut4 ± 10 of 4 0.30Down
Tubule2 ± 00 of 4 0.10Down
Hindgut2 ± 00 of 4 0.10Down
Heart1 ± 00 of 4 0.11Down
Fat body4 ± 30 of 4 0.25Down
Ovary0 ± 00 of 4 0.00Down
Testis1 ± 00 of 4 0.10Down
Male accessory glands1 ± 00 of 4 0.10Down
Virgin spermatheca1 ± 00 of 4 0.12Down
Mated spermatheca2 ± 00 of 4 0.14Down
Adult carcass2 ± 10 of 4 0.20Down
Larval CNS551 ± 884 of 434.83Up
Larval Salivary gland1 ± 00 of 4 0.08Down
Larval midgut3 ± 20 of 4 0.25Down
Larval tubule3 ± 10 of 4 0.20Down
Larval hindgut1 ± 00 of 4 0.10Down
Larval fat body6 ± 20 of 4 0.40Down
Larval trachea5 ± 50 of 4 0.34Down
Larval carcass12 ± 30 of 4 0.81None
S2 cells (growing)1 ± 00 of 4 0.08Down
Whole fly15 ± 12 of 4

Looking for FBgn0013767. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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